DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5065 and CG12268

DIOPT Version :9

Sequence 1:NP_001163168.1 Gene:CG5065 / 36860 FlyBaseID:FBgn0034145 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001247272.1 Gene:CG12268 / 42833 FlyBaseID:FBgn0039131 Length:531 Species:Drosophila melanogaster


Alignment Length:514 Identity:187/514 - (36%)
Similarity:306/514 - (59%) Gaps:7/514 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 RAD-DTSYVPIAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTE 173
            |:| |.....||:|||.:::.|||.||||||||||||||||.::..||||||.|:|.:.|.|..:
  Fly     5 RSDADCGESDIAKFYANKTILITGATGFMGKVLVEKLLRSCADLNVIYLLIRTKKGVDPSVRKEQ 69

  Fly   174 LLNAPLFESLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKL 238
            .....:|..|.::.|..:.||..:.||:...:||:|..|.|.|..||.||||.||.|:||:.|:.
  Fly    70 YFKCVIFGKLLEKNPGIVDKVRVVKGDLLEPDLGLSANDTNTLASNVEVVFHCAANVRFDQPLRP 134

  Fly   239 SVTINMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWLPEDI 303
            .|.:|::||.:::.|..:|..|.||:||||:||.|:.:.:.|..|..|.||..||.::..:.::.
  Fly   135 MVMMNVVGTLKVLRLAEKMSQLQALVHVSTSYCQCNESVLEERAYPAPQNPFSIIEMVETMDDEA 199

  Fly   304 LDQLTPRLIGKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGL 368
            |.::||:|:...||||.::|||:|.::.:....||:.|.|||||||:::||..||::..||||||
  Fly   200 LAEITPKLLNGLPNTYAYSKALSEDLICRYNNKLPIIITRPSIVTAAIHEPLPGWIEGVNGPTGL 264

  Fly   369 VSALAKGMFRTMMCEKNYVADMVPVDIVINLMIAAAWRTAT------RKSNNLLIYNCCTGQRNP 427
            :...|:|:.|:|.|..:|.:.::|||..||.||...::...      .|...:...|.|...:..
  Fly   265 MIGAARGVIRSMHCNPDYASTVIPVDKAINGMILCGYQRGKASQEKGNKQTGVEFCNLCISSKAL 329

  Fly   428 IIWSEFVKHAMTSVRKHPLEGCLWYPTGDLRMNRPMNTLNCIAKHFLPAYILDGVARIMGKKPFV 492
            :.|.:.::.......:.||...||||.|.::.|...:....|..|:||||.:|....:.|:|||:
  Fly   330 MSWGDSIETGRRFFYETPLSFALWYPGGSIKKNYYHHLFCVIFFHYLPAYFIDFWLLVFGQKPFL 394

  Fly   493 VNVQNKIAKAVECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVERYVLGFR 557
            :|||.|::..::.|:|:.|::|.|:::....:...||..|:::|...|..:||:.|:..|::|.|
  Fly   395 LNVQRKVSMGLKLLQYYTTKRWEFRNERFQEMSSQLSLLDQDLFDTSVGQVNWETYISNYIVGMR 459

  Fly   558 EFLFKQRPESLPASRKRMLRLYYLHQLTKLVAVLLTWRFLMSRSKRLNDLWSSFLENAL 616
            .::..:..::||.:||.:.|||.|..::|::...|::.||.:......:...:|:.::|
  Fly   460 TYILGESEDTLPQARKVLRRLYILDWVSKVLFFSLSFWFLWTHLDGFVERSDAFIRSSL 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5065NP_001163168.1 FAR-N_SDR_e 126..445 CDD:187547 126/324 (39%)
Sterile 472..562 CDD:281068 30/89 (34%)
CG12268NP_001247272.1 PLN02996 12..463 CDD:215538 170/450 (38%)
FAR-N_SDR_e 22..347 CDD:187547 126/324 (39%)
FAR_C 372..463 CDD:176924 30/90 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466822
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 1 0.950 - 0.712175 Normalized mean entropy S3219
OMA 1 1.010 - - QHG28069
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
1211.860

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