DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5065 and Far2

DIOPT Version :9

Sequence 1:NP_001163168.1 Gene:CG5065 / 36860 FlyBaseID:FBgn0034145 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001334445.1 Gene:Far2 / 330450 MGIID:2687035 Length:515 Species:Mus musculus


Alignment Length:493 Identity:207/493 - (41%)
Similarity:312/493 - (63%) Gaps:6/493 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAPLFESL 183
            ||.||:.:|:.|||.|||:||||:|||.|:.|.::.||:|:|||.||.:..|:.::||:.|||.:
Mouse     4 IAAFYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNSKLFEKV 68

  Fly   184 RQEKPKELSKVIPISGDITSEELGISEKD-QNLL-CRNVSVVFHSAATVKFDEKLKLSVTINMLG 246
            ::..|....|:.|||.|:...:..||::| |.|| |.|  ::||.||||:||..|:.:|.:|:..
Mouse    69 KEVCPNVHEKIRPISADLNQRDFAISKEDVQELLSCTN--IIFHCAATVRFDAHLREAVQLNVTA 131

  Fly   247 TKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWLPEDILDQLTPRL 311
            |::|:.:..:|..|:|.||:|||:.||:.:.:.||||..|..|..||..:.||.:.|::::||:|
Mouse   132 TQQLLLMASQMPKLEAFIHISTAFSNCNLSHIDEVIYPCPVEPRKIIDSMEWLDDSIIEEITPKL 196

  Fly   312 IGKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGM 376
            ||.||||||:||||.|.::.:|:|||.|||||||||.|:..|||.|||||.|||:||:.|..||.
Mouse   197 IGDRPNTYTYTKALGEIVVQQESGNLNVAIVRPSIVGATWQEPFPGWVDNLNGPSGLIIATGKGF 261

  Fly   377 FRTMMCEKNYVADMVPVDIVINLMIAAAWRTATRKSNNLLIYNCCTGQRNPIIWSEFVKHAMTSV 441
            .|::......|||::|||.|:||.||..|.||..:..:.|||:..:|..||..|.:.....:.::
Mouse   262 LRSIKATPMAVADVIPVDTVVNLTIAVGWYTAVHRPKSTLIYHSTSGNLNPCNWYKMGLQVLATI 326

  Fly   442 RKHPLEGCLWYPTGDL-RMNRPMNTLNCIAKHFLPAYILDGVARIMGKKPFVVNVQNKIAKAVEC 505
            .|.|.|.....|..|. ..|...:..|.:: |.:||.|.|...|:.|:||.::.:.|::.|.:..
Mouse   327 EKIPFESAFRRPNADFTTSNFTTHYWNTVS-HRVPAIIYDFYLRLTGRKPRMLKLMNRLLKTISM 390

  Fly   506 LEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVERYVLGFREFLFKQRPESLPA 570
            ||||....|.:..:|...||..|||:|:.:|.||||.:||.:|:|.||||.:::|.|:....:|.
Mouse   391 LEYFINHSWEWSTNNTEMLLSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDLAGIPK 455

  Fly   571 SRKRMLRLYYLHQLTKLVAVLLTWRFLMSRSKRLNDLW 608
            :::.:.||..:|.|......|:.||.|::||:...::|
Mouse   456 AKQHLRRLRNIHYLFNTALFLIIWRLLIARSQMARNVW 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5065NP_001163168.1 FAR-N_SDR_e 126..445 CDD:187547 147/320 (46%)
Sterile 472..562 CDD:281068 37/89 (42%)
Far2NP_001334445.1 FAR-N_SDR_e 11..315 CDD:187547 145/305 (48%)
Sterile 357..447 CDD:397244 37/89 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847925
Domainoid 1 1.000 288 1.000 Domainoid score I1561
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H69247
Inparanoid 1 1.050 440 1.000 Inparanoid score I1650
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - otm42332
orthoMCL 1 0.900 - - OOG6_100550
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.660

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