DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5065 and CG4020

DIOPT Version :9

Sequence 1:NP_001163168.1 Gene:CG5065 / 36860 FlyBaseID:FBgn0034145 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001259264.1 Gene:CG4020 / 31522 FlyBaseID:FBgn0029821 Length:494 Species:Drosophila melanogaster


Alignment Length:502 Identity:187/502 - (37%)
Similarity:286/502 - (56%) Gaps:22/502 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAPLFESL 183
            |.:.:..:.:|:||.:||:||.|:||||||||::..||:|:|||:|..:..||.....:.|:|.|
  Fly     3 IPEAFEDQEIFVTGASGFVGKALIEKLLRSCPKLGRIYVLMRPKKGHTIEERLQLQWESRLYERL 67

  Fly   184 RQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKLSVTINMLGTK 248
            |:|:|...||::.|:||:....|||...|...| |||::|:||||:|:||:.|..::.:|..||.
  Fly    68 RREQPNARSKLVAIAGDVEQLGLGIGSADLERL-RNVNIVYHSAASVRFDDALSTAILLNTRGTH 131

  Fly   249 RLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWLPEDILDQLTPRLIG 313
            .||:|......|.|.:||||.|.|....:|.|.:|.|..:....|.|......:|||....:...
  Fly   132 ELVKLALEWPKLKAFVHVSTTYSNPGVLEVEERVYPPLADWRTTIKLAETYDAEILDIFNLKYGN 196

  Fly   314 KRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMFR 378
            .:||||||||:|||.::.:....||:.|.|||||.:::.||..||.|||||||||:.|...|:.|
  Fly   197 FQPNTYTFTKSLAEQVVNEYRDRLPIFIFRPSIVVSTIEEPVPGWADNFNGPTGLLVACGVGILR 261

  Fly   379 TMMCEKNYVADMVPVDIVINLMIAAAWR-----TATRKSNNLLIYNCCTGQRNPIIWSEFVKHAM 438
            :..|:.|.|||.||.|||...:|.:.::     .:..|.::|.:.||.|...:||...|.:....
  Fly   262 SQNCDPNIVADFVPADIVARTLITSVYKFMGESKSRAKDSDLYVVNCATANISPITMGEVIDIGK 326

  Fly   439 TSVRKHPLEGCLWYPTGDLRMNRPMNTLNCIAKHFLPAYILDGVARIMGKKPFVVNVQNKIAKAV 503
            |.:||:|.|..||.|.|.:.....::.:.....|.|.|.::|.:.|:..:|||::.:|.:|..|.
  Fly   327 TFIRKNPFEKTLWLPGGGMTTCPVLHFVRFCTMHLLMAIVVDTLLRLYNEKPFLMKLQRRIFAAF 391

  Fly   504 ECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFD-VRH--INWDKYVERYVLGFREFLFKQRP 565
            ..|:.||..:|.|::||..| ||.:.|.: |:..|. ::|  ||:.::.:..:.|.:|||.|:.|
  Fly   392 SALQVFAMTEWHFQNDNFRA-LHDVVPAN-EVSNFGFMQHANINYTEFFQHGIRGAKEFLLKESP 454

  Fly   566 ESLPASRKRMLRLYYLHQLTKLVA----VLLTWRFLMSRSKRLNDLW 608
            ||..|:|.|:...|.|..|.:.:.    :.|.:|||:.       ||
  Fly   455 ESSSAARFRVKIFYVLDFLCRGIVYSFLLRLIFRFLVR-------LW 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5065NP_001163168.1 FAR-N_SDR_e 126..445 CDD:187547 133/323 (41%)
Sterile 472..562 CDD:281068 31/92 (34%)
CG4020NP_001259264.1 FAR-N_SDR_e 12..333 CDD:187547 133/321 (41%)
FAR_C 359..450 CDD:176924 30/92 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466825
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 1 0.950 - 0.712175 Normalized mean entropy S3219
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
1110.850

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