DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5065 and CG4020

DIOPT Version :10

Sequence 1:NP_611143.1 Gene:CG5065 / 36860 FlyBaseID:FBgn0034145 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_572276.1 Gene:CG4020 / 31522 FlyBaseID:FBgn0029821 Length:494 Species:Drosophila melanogaster


Alignment Length:502 Identity:187/502 - (37%)
Similarity:286/502 - (56%) Gaps:22/502 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAPLFESL 183
            |.:.:..:.:|:||.:||:||.|:||||||||::..||:|:|||:|..:..||.....:.|:|.|
  Fly     3 IPEAFEDQEIFVTGASGFVGKALIEKLLRSCPKLGRIYVLMRPKKGHTIEERLQLQWESRLYERL 67

  Fly   184 RQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKLSVTINMLGTK 248
            |:|:|...||::.|:||:....|||...|...| |||::|:||||:|:||:.|..::.:|..||.
  Fly    68 RREQPNARSKLVAIAGDVEQLGLGIGSADLERL-RNVNIVYHSAASVRFDDALSTAILLNTRGTH 131

  Fly   249 RLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWLPEDILDQLTPRLIG 313
            .||:|......|.|.:||||.|.|....:|.|.:|.|..:....|.|......:|||....:...
  Fly   132 ELVKLALEWPKLKAFVHVSTTYSNPGVLEVEERVYPPLADWRTTIKLAETYDAEILDIFNLKYGN 196

  Fly   314 KRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMFR 378
            .:||||||||:|||.::.:....||:.|.|||||.:::.||..||.|||||||||:.|...|:.|
  Fly   197 FQPNTYTFTKSLAEQVVNEYRDRLPIFIFRPSIVVSTIEEPVPGWADNFNGPTGLLVACGVGILR 261

  Fly   379 TMMCEKNYVADMVPVDIVINLMIAAAWR-----TATRKSNNLLIYNCCTGQRNPIIWSEFVKHAM 438
            :..|:.|.|||.||.|||...:|.:.::     .:..|.::|.:.||.|...:||...|.:....
  Fly   262 SQNCDPNIVADFVPADIVARTLITSVYKFMGESKSRAKDSDLYVVNCATANISPITMGEVIDIGK 326

  Fly   439 TSVRKHPLEGCLWYPTGDLRMNRPMNTLNCIAKHFLPAYILDGVARIMGKKPFVVNVQNKIAKAV 503
            |.:||:|.|..||.|.|.:.....::.:.....|.|.|.::|.:.|:..:|||::.:|.:|..|.
  Fly   327 TFIRKNPFEKTLWLPGGGMTTCPVLHFVRFCTMHLLMAIVVDTLLRLYNEKPFLMKLQRRIFAAF 391

  Fly   504 ECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFD-VRH--INWDKYVERYVLGFREFLFKQRP 565
            ..|:.||..:|.|::||..| ||.:.|.: |:..|. ::|  ||:.::.:..:.|.:|||.|:.|
  Fly   392 SALQVFAMTEWHFQNDNFRA-LHDVVPAN-EVSNFGFMQHANINYTEFFQHGIRGAKEFLLKESP 454

  Fly   566 ESLPASRKRMLRLYYLHQLTKLVA----VLLTWRFLMSRSKRLNDLW 608
            ||..|:|.|:...|.|..|.:.:.    :.|.:|||:.       ||
  Fly   455 ESSSAARFRVKIFYVLDFLCRGIVYSFLLRLIFRFLVR-------LW 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5065NP_611143.1 FAR-N_SDR_e 126..445 CDD:187547 133/323 (41%)
Sterile 471..562 CDD:460779 31/93 (33%)
CG4020NP_572276.1 FAR-N_SDR_e 12..333 CDD:187547 133/321 (41%)
Sterile 359..451 CDD:460779 31/93 (33%)

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