DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5065 and Far1

DIOPT Version :9

Sequence 1:NP_001163168.1 Gene:CG5065 / 36860 FlyBaseID:FBgn0034145 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001011933.1 Gene:Far1 / 293173 RGDID:1306647 Length:515 Species:Rattus norvegicus


Alignment Length:492 Identity:200/492 - (40%)
Similarity:320/492 - (65%) Gaps:0/492 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 VPIAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAPLFE 181
            |.|.::|.|:::.:||.|||:||||:||||||||::.::|:|:|.|.||....|:.|:|:..||:
  Rat     2 VSIPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLFD 66

  Fly   182 SLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKLSVTINMLG 246
            .||.|.|....|:|.|:.::|..:|.:||:|:.::..:.:|:||.||||:|:|.|:.:|.:|::.
  Rat    67 RLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIA 131

  Fly   247 TKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWLPEDILDQLTPRL 311
            |::|:.|..:|.:|:..:||||||..|:|..:.||:|.||.:|..:|..:.|:.:.:::.:||:|
  Rat   132 TRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKL 196

  Fly   312 IGKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGM 376
            ||.|||||.:||||||:::.:|...|.|||||||||.||..|||.||:||||||:||..|..||:
  Rat   197 IGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGI 261

  Fly   377 FRTMMCEKNYVADMVPVDIVINLMIAAAWRTATRKSNNLLIYNCCTGQRNPIIWSEFVKHAMTSV 441
            .|||....|.:||:||||:|:|..:||||.:...:..|:::|||.||..||..|.|...:...|.
  Rat   262 LRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNIMVYNCTTGSTNPFHWGEVGDYLNHSF 326

  Fly   442 RKHPLEGCLWYPTGDLRMNRPMNTLNCIAKHFLPAYILDGVARIMGKKPFVVNVQNKIAKAVECL 506
            :.:||.....:|......|..|.......||.:||.:||...|:.|:||:::....::.||:..|
  Rat   327 KTNPLNQVFRHPYVKFYSNNLMLHYWKGVKHTVPALLLDLALRLTGQKPWMMKTITRLHKAMVFL 391

  Fly   507 EYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVERYVLGFREFLFKQRPESLPAS 571
            |||.:..|.:..|||:.|::.|:|:|::.|..|||.::|.:|:|.|.:|.::::..:....|||:
  Rat   392 EYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTKKYVLNEEMSGLPAA 456

  Fly   572 RKRMLRLYYLHQLTKLVAVLLTWRFLMSRSKRLNDLW 608
            ||.:.:|..:......:.|:|.||..::||:...::|
  Rat   457 RKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIW 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5065NP_001163168.1 FAR-N_SDR_e 126..445 CDD:187547 145/318 (46%)
Sterile 472..562 CDD:281068 32/89 (36%)
Far1NP_001011933.1 PLN02996 2..446 CDD:215538 187/443 (42%)
FAR-N_SDR_e 11..330 CDD:187547 145/318 (46%)
Sterile 371..447 CDD:281068 26/75 (35%)
Necessary and sufficient for PEX19-mediated localization into peroxisome membrane. /evidence=ECO:0000250|UniProtKB:Q8WVX9 451..507 13/43 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351485
Domainoid 1 1.000 288 1.000 Domainoid score I1509
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 437 1.000 Inparanoid score I1632
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - otm44391
orthoMCL 1 0.900 - - OOG6_100550
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.800

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