DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5065 and fard-1

DIOPT Version :9

Sequence 1:NP_001163168.1 Gene:CG5065 / 36860 FlyBaseID:FBgn0034145 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001370741.1 Gene:fard-1 / 180582 WormBaseID:WBGene00022200 Length:536 Species:Caenorhabditis elegans


Alignment Length:492 Identity:199/492 - (40%)
Similarity:302/492 - (61%) Gaps:16/492 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAPLFESL 183
            :...|||.||.:||||||:|||:|||||.:..:|:||||:||.::|:....||:.||:.|||..:
 Worm     5 VRDVYAGSSVLLTGGTGFLGKVIVEKLLWTIDDIQNIYLMIRTRKGKNPQERLSGLLHDPLFNRI 69

  Fly   184 RQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKLSVTINMLGTK 248
            |||||:...|:..|.||:..|.||:..:|..|:..||:||.||||||||||.|:.:||:|::|||
 Worm    70 RQEKPEAFDKLKAIGGDMMVENLGMDPEDVMLIRDNVNVVIHSAATVKFDEHLRAAVTMNVIGTK 134

  Fly   249 RLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWLPEDILDQLTPRLIG 313
            |:::|||::..|..|:||||||.||||.:.:|.||..|..|..::..::|:.::.|.::||:::|
 Worm   135 RIIDLCHQIKDLKVLVHVSTAYANCDRFETTEKIYKSPMAPQKLVDALSWMDDETLTKITPKILG 199

  Fly   314 KRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMFR 378
            .||||||.||||||..:..||.::||.|:|||||.|....|..||.||.|||||:.:|:.:|:..
 Worm   200 LRPNTYTLTKALAESTIETEAKDIPVIIIRPSIVGAMWQGPLPGWTDNINGPTGIFAAVGRGVLT 264

  Fly   379 TMMCEKNYVADMVPVDIVINLMIAAAWRTATRKSNNLLIYNCCTGQRNPIIWSEFVKHAMTSVRK 443
            .|.......||::|||||.|::||:|....:..:..:.:.:|.:|:.||:.|...|.......:|
 Worm   265 NMCGSSESKADIIPVDIVANMIIASASYRTSINTTEIPVIHCSSGELNPLYWGHIVLFLEQFYKK 329

  Fly   444 HPLEGCLWYPTGDLRMNRPMNTLNCIAKHFLPAYILDGVARIMGKKPFVVNVQNKIAKAVECLEY 508
            :|:|.|...|:.....:|.:..:|...||.:||.|.|..||::||:...|.:.:|:.|.:|.|.:
 Worm   330 YPMEQCFAVPSTYFHKSRSLFLINYYIKHHIPAAISDISARLIGKRKNNVKLYSKVWKMIETLHF 394

  Fly   509 FATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVERYVLGFREFLFKQRPESLPASRK 573
            |.||.|.|....:......::|.|::.:.||||.::|:.|:..||:|.::||.|:..|:|..||.
 Worm   395 FTTRGWSFNARGLPEFFEKMTPADQKEYNFDVRQVDWNSYLFDYVMGIKKFLLKENLENLNRSRA 459

  Fly   574 RMLRLYYLHQLT----------------KLVAVLLTW 594
            .:|::....|:.                |.....|||
 Worm   460 HLLKMRIRRQVIAAIVYAGFISTIGRKWKKTTQYLTW 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5065NP_001163168.1 FAR-N_SDR_e 126..445 CDD:187547 146/318 (46%)
Sterile 472..562 CDD:281068 32/89 (36%)
fard-1NP_001370741.1 FAR-N_SDR_e 13..331 CDD:187547 146/317 (46%)
Sterile 358..448 CDD:397244 32/89 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165452
Domainoid 1 1.000 285 1.000 Domainoid score I855
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69247
Inparanoid 1 1.050 405 1.000 Inparanoid score I1079
Isobase 1 0.950 - 0.712175 Normalized mean entropy S3219
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - oto17758
orthoMCL 1 0.900 - - OOG6_100550
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4354
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.780

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