DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5065 and far1

DIOPT Version :9

Sequence 1:NP_001163168.1 Gene:CG5065 / 36860 FlyBaseID:FBgn0034145 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_017948360.1 Gene:far1 / 100038270 XenbaseID:XB-GENE-973776 Length:518 Species:Xenopus tropicalis


Alignment Length:495 Identity:205/495 - (41%)
Similarity:323/495 - (65%) Gaps:3/495 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 VPIAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAPLFE 181
            :.|.:||.|::|.|||.||||||||:||||||||.::.:|:|:|||..|:...|:.|:::..||:
 Frog     2 ISIPEFYRGKNVLITGATGFMGKVLLEKLLRSCPNVKAVYVLVRPKASQKPRERVAEMMSCKLFD 66

  Fly   182 SLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKLSVTINMLG 246
            .||.|:|:...|||.||.::|..||.:|::||::|...:.:|||.||||:|:|.|:.::.:|::.
 Frog    67 RLRDEQPECAQKVIAISSELTQPELDLSKEDQDMLIDCIDIVFHCAATVRFNESLRDAMQLNVIA 131

  Fly   247 TKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWLPEDILDQLTPRL 311
            |::|:.|..::..|:..|||||||.||:|..:.|::|.||.:|..:|..:.|:.:.:::.:||:|
 Frog   132 TRQLLYLAQKIKKLEVFIHVSTAYANCNRKQIEEMVYPPPVDPKKLIESLEWMDDGLVNDITPKL 196

  Fly   312 IGKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGM 376
            ||.||||||:||||||:::.:|...|.:||||||||.||..|||.||:||||||:||..|..||:
 Frog   197 IGDRPNTYTYTKALAEYVVQQEGSKLNIAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGI 261

  Fly   377 FRTMMCEKNYVADMVPVDIVINLMIAAAWRTATR---KSNNLLIYNCCTGQRNPIIWSEFVKHAM 438
            .|||....|.|||::|||:|:|..:||||.:...   :..|:|:|||.||..||..|.|...|.:
 Frog   262 LRTMRASNNAVADLIPVDVVVNTTLAAAWYSGVNRYSRPRNILVYNCTTGGTNPFHWGEVEYHVI 326

  Fly   439 TSVRKHPLEGCLWYPTGDLRMNRPMNTLNCIAKHFLPAYILDGVARIMGKKPFVVNVQNKIAKAV 503
            ::.:::|||.....|..:|..|..:........|..||::.|...||.|:.|.::....::.||:
 Frog   327 STFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDVYLRITGRSPRMMKTITRLHKAM 391

  Fly   504 ECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVERYVLGFREFLFKQRPESL 568
            ..||||.:..|.:.::|.:.|:..|||.|::.|.||||.::|.:|:|.|.:|.::::..:....|
 Frog   392 MLLEYFTSNSWVWNNENTNMLMSQLSPDDKKAFNFDVRQLHWAEYMENYCMGTKKYVLNEEMSGL 456

  Fly   569 PASRKRMLRLYYLHQLTKLVAVLLTWRFLMSRSKRLNDLW 608
            ||:||.:.:|..:......:.|:|.||..::||:...::|
 Frog   457 PAARKHLNKLRNIRYGFNTILVVLIWRVFIARSQMARNIW 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5065NP_001163168.1 FAR-N_SDR_e 126..445 CDD:187547 151/321 (47%)
Sterile 472..562 CDD:281068 31/89 (35%)
far1XP_017948360.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 297 1.000 Domainoid score I1452
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 451 1.000 Inparanoid score I1574
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - oto102204
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4354
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.100

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