DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8303 and FAR1

DIOPT Version :10

Sequence 1:NP_611141.3 Gene:CG8303 / 36858 FlyBaseID:FBgn0034143 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_197642.1 Gene:FAR1 / 832311 AraportID:AT5G22500 Length:491 Species:Arabidopsis thaliana


Alignment Length:504 Identity:115/504 - (22%)
Similarity:209/504 - (41%) Gaps:106/504 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EFFAHKNIFVTGGTGFLGTVLIEALLDTHPDIGTIYVLVRGKRKFDPNERIR-RLLQKPIFE--- 101
            :|..:|.|.:||..|||..||:|.:|...|::..||:|:|...:....:|:| .:::..:|:   
plant     7 QFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVMEIDLFKVLR 71

  Fly   102 -KYSEKTLS-----KVVPVVGELSEPNFGF-GPELLQELIDRVNVIYHSAATIKFSSPLRTAIRT 159
             ...|..|:     |:|||.|::|..|.|. ..:|:|.:...:::|.:.|||..|.......:..
plant    72 NNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAATTNFDERYDIGLGI 136

  Fly   160 NLTGTMRTIELAKQLKQLAAYIYCSTAFCNSNNRGLIAEEVYK--------SQFD---PYEMMKM 213
            |..|.:..:..||:..:....::.|||:.:....||:.|:.:|        .:.|   .:::||.
plant   137 NTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFKMGETLSGDRELDINIEHDLMKQ 201

  Fly   214 AEDDSAWEDFTDQKCKGYIRDH----------PNTYTFTKNLSENLLMAEMSGLPAAIVRPSIVY 268
            ...:  .:|.:|::....::|.          ||||.|||.:.|.|:......||..|:||:::.
plant   202 KLKE--LQDCSDEEISQTMKDFGMARAKLHGWPNTYVFTKAMGEMLMGKYRENLPLVIIRPTMIT 264

  Fly   269 GTLEHPMKGWVGNANSGHLGFLAGFVKGIFRTMCGNANAVIDIIPCDYVINSSLVMGW-YVGTRK 332
            .|:..|..||:....:.. ..:..:.||..:....::|:|.|:||.|.|:|:.:.... :.|...
plant   265 STIAEPFPGWIEGLKTLD-SVIVAYGKGRLKCFLADSNSVFDLIPADMVVNAMVAAATAHSGDTG 328

  Fly   333 LEQPEIIHCTSGEVNPLNLAEFCTIINDSVERHPPNSFVWKPVTKLRNG--------------WR 383
            ::  .|.|..|...||:...:    ::|...|:    |..:|:.. |||              .:
plant   329 IQ--AIYHVGSSCKNPVTFGQ----LHDFTARY----FAKRPLIG-RNGSPIIVVKGTILSTMAQ 382

  Fly   384 YNLFFYLFHLLPAMVFIIPEKLFGIGMPQHTAYEYMRVFQKGTKAFDYFLDKDFRYSLKNALRIS 448
            ::|:..|.:.||..:.    :|..|..|......|                .|....:|.|:|:.
plant   383 FSLYMTLRYKLPLQIL----RLINIVYPWSHGDNY----------------SDLSRKIKLAMRLV 427

  Fly   449 ALIP------------ESDRRR-------------YNFDASQCDWSEFI 472
            .|..            .::|.|             :.||....||..:|
plant   428 ELYQPYLLFKGIFDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYI 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8303NP_611141.3 FAR-N_SDR_e 46..366 CDD:187547 89/352 (25%)
Sterile 391..485 CDD:460779 18/107 (17%)
FAR1NP_197642.1 PLN02996 1..490 CDD:215538 115/504 (23%)

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