DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8303 and CG17562

DIOPT Version :10

Sequence 1:NP_611141.3 Gene:CG8303 / 36858 FlyBaseID:FBgn0034143 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_650566.1 Gene:CG17562 / 42021 FlyBaseID:FBgn0038449 Length:499 Species:Drosophila melanogaster


Alignment Length:472 Identity:144/472 - (30%)
Similarity:228/472 - (48%) Gaps:43/472 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 IPEFFAHKNIFVTGGTGFLGTVLIEALLDTHPDIGTIYVLVRGKRKFDPNERIRRLLQKPIFE-- 101
            |...|..|.:|:||.|||||.|:||.||.| .::..||||:|.||..:..:||....:..:||  
  Fly     5 IQRCFRSKTVFLTGATGFLGKVVIEKLLRT-TEVKRIYVLIRPKRGVEIKDRIITWSKDAVFELL 68

  Fly   102 -KYSEKTLSKVVPVVGELSEPNFGFGPELLQELIDRVNVIYHSAATIKFSSPLRTAIRTNLTGTM 165
             |...:.|.:|.|:.|:..:.:.|......:.|...|.::.|.|||::|:.||..|:..|...|.
  Fly    69 LKSKPEALQRVCPIAGDCLDFDLGISENDRRLLASEVQIVIHGAATVRFNEPLHVALAINTRATK 133

  Fly   166 RTIELAKQLKQLAAYIYCSTAFCNSNNRGLIAEEVY--KSQFDPY-------EMMKMAEDDSAWE 221
            ..|:|||:::||.|:::.||||.|.        .:|  |..|.|.       :::.|||..|  :
  Fly   134 LMIQLAKEMRQLEAFVHVSTAFSNC--------VIYNIKENFYPEHLNCSSDKVLAMAELMS--D 188

  Fly   222 DFTDQKCKGYIRDHPNTYTFTKNLSENLLMAEMSGLPAAIVRPSIVYGTLEHPMKGWVGNANSGH 286
            :..|...:..:...|||||:||.|:|::::.|..|||..|.||:::....:.|:.||:.|. .|.
  Fly   189 ELLDNMEQALLGSFPNTYTYTKALAEDVILKEAGGLPLCIFRPAVIIAAHKEPISGWIDNM-YGP 252

  Fly   287 LGFLAGFVKGIFRTMCGNANAVIDIIPCDYVINSSLVMGW-------YVGTRKLEQPEIIHCTSG 344
            :..|.|..:|:.|....:.:|...::|.||..|.:|...|       .:||:  |.|.|......
  Fly   253 MAILFGVARGVLRIATIDHHAEASLVPVDYCANLTLACTWKTIVEGNEMGTQ--ETPLIYQLAPI 315

  Fly   345 EVNPLNLAEFCTIINDSVERHPPNSFVWKP-VTKLRNGWRYNLFFYLFHLLPAMVFIIPEKLFGI 408
            |.|.:...||.....|.....|....:|.| :..:...|.:.|..:.:|.|||..|.:...|.| 
  Fly   316 EQNKITHGEFIRHALDGRTNCPLTKMIWYPFIHCITVPWLFPLAAFFYHTLPAYFFDLALWLSG- 379

  Fly   409 GMPQHTAYEYMRVFQKGTKAFDY---FLDKDFRYSLKNALRISALIPESDRRRYNFDASQCDWSE 470
            ..|:     .::|:||..|....   |..|.:|:.::|...:...:.|.|||.|.||....:|.|
  Fly   380 RKPR-----LVKVYQKIHKTLGILGPFACKSWRFDMRNTDHLRQQMSEEDRRIYYFDMVSLNWKE 439

  Fly   471 FIDRCLIGIRRFYFKES 487
            :..:.|.|:|:|...|:
  Fly   440 YFVQALRGMRQFLGNEA 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8303NP_611141.3 FAR-N_SDR_e 46..366 CDD:187547 107/338 (32%)
Sterile 391..485 CDD:460779 29/96 (30%)
CG17562NP_650566.1 FAR-N_SDR_e 12..329 CDD:187547 106/330 (32%)
Sterile 363..452 CDD:460779 28/94 (30%)

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