DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8306 and FAR1

DIOPT Version :9

Sequence 1:NP_611140.3 Gene:CG8306 / 36857 FlyBaseID:FBgn0034142 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_197642.1 Gene:FAR1 / 832311 AraportID:AT5G22500 Length:491 Species:Arabidopsis thaliana


Alignment Length:513 Identity:136/513 - (26%)
Similarity:213/513 - (41%) Gaps:83/513 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SPITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEE-------- 60
            |....|...:.:.||||.||:...:|||:||..|||..:|||:||...||..:||..        
plant     3 SNCVQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVMEIDLF 67

  Fly    61 --LKKNSVFDKFKELQLQSRLSKIVPIEGDVGLEHLGISPKDR-QTLIDNVNVVFHSAATLDFFQ 122
              |:.|...|....|..:    ||||:.||:.:::||:...|. |.:...::::.:.|||.:|.:
plant    68 KVLRNNLGEDNLNALMRE----KIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAATTNFDE 128

  Fly   123 SLKETTNINLRGTRRVVELCQQIKNLDALVHVSSAYVNAYLTKVEEKLYPAPEDP----EKIIQL 183
            .......||..|...|:...::......|:|||:||::.             |.|    ||..::
plant   129 RYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISG-------------EQPGLLLEKPFKM 180

  Fly   184 SETLNDD--------------ALKELE-------PKLLKDH----------PNTYTFTKHLAEHE 217
            .|||:.|              .||||:       .:.:||.          ||||.|||.:.|..
plant   181 GETLSGDRELDINIEHDLMKQKLKELQDCSDEEISQTMKDFGMARAKLHGWPNTYVFTKAMGEML 245

  Fly   218 VANVASKFPCGIVRPSMITAAWKEPIPGWTISKNGPQGFFMGASKGVLRRLPLDPSIIMDYIPID 282
            :.......|..|:||:|||:...||.|||...........:...||.|:....|.:.:.|.||.|
plant   246 MGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFLADSNSVFDLIPAD 310

  Fly   283 VVVNGIITTGYYVNSLQAKNGGRPADLQIFHLTSSTYKPFRFELMTDKINSYLHDYPL----NSA 343
            :|||.::...       ..:.|......|:|:.||...|..|..:.|....|....||    .|.
plant   311 MVVNAMVAAA-------TAHSGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFAKRPLIGRNGSP 368

  Fly   344 VWYPNLRLVKSLWVFRLSAILFHFIPAIILDLVTKI-----GGGRPILVRLHKNVWNSLNTLEKF 403
            :......::.::..|.|...|.:.:|..||.|:..:     |.....|.|..|.....:...:.:
plant   369 IIVVKGTILSTMAQFSLYMTLRYKLPLQILRLINIVYPWSHGDNYSDLSRKIKLAMRLVELYQPY 433

  Fly   404 IFTEWHFD--SKRLLALSKTLNIVD-KKKFFIDIGELAWDEYFSNT-ILGVRQYLSKE 457
            :..:..||  :...|.:.:..||.: ...|..|...:.||.|.:|| |.|:..::.|:
plant   434 LLFKGIFDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYITNTHIPGLITHVLKQ 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8306NP_611140.3 PLN02996 6..456 CDD:215538 134/508 (26%)
FAR-N_SDR_e 13..339 CDD:187547 105/371 (28%)
FAR_C 364..454 CDD:176924 23/98 (23%)
FAR1NP_197642.1 PLN02996 1..490 CDD:215538 135/510 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 1 1.010 - - QHG56516
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1111.030

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