DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8306 and FAR2

DIOPT Version :9

Sequence 1:NP_611140.3 Gene:CG8306 / 36857 FlyBaseID:FBgn0034142 Length:516 Species:Drosophila melanogaster
Sequence 2:XP_011519049.1 Gene:FAR2 / 55711 HGNCID:25531 Length:535 Species:Homo sapiens


Alignment Length:509 Identity:161/509 - (31%)
Similarity:275/509 - (54%) Gaps:14/509 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SPITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEELKKNSVFD 68
            |.|..||.|:::.|||||||:|..::|||.|..|::..:|:|:|.|.|:::|:|:.::..:.:|:
Human    22 STIAAFYGGKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQILDSKLFE 86

  Fly    69 KFKELQLQSRLSKIVPIEGDVGLEHLGISPKDRQTLIDNVNVVFHSAATLDFFQSLKETTNINLR 133
            |.||: ..:...||..|..|:......||.:|.|.|:...|::||.|||:.|..:|:....:|:.
Human    87 KVKEV-CPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDTLRHAVQLNVT 150

  Fly   134 GTRRVVELCQQIKNLDALVHVSSAYVNAYLTKVEEKLYPAPEDPEKIIQLSETLNDDALKELEPK 198
            .||:::.:..|:..|:|.:|:|:||.|..|..::|.:||.|.:|:|||...|.|:|..:.|:.||
Human   151 ATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVIYPCPVEPKKIIDSLEWLDDAIIDEITPK 215

  Fly   199 LLKDHPNTYTFTKHLAEHEVANVASKFPCGIVRPSMITAAWKEPIPGWTISKNGPQGFFMGASKG 263
            |::|.||.||:||.|.|..|...:......|:|||::.|.|:||.|||..:.|||.|..:...||
Human   216 LIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIIIATGKG 280

  Fly   264 VLRRLPLDPSIIMDYIPIDVVVNGIITTGYYVNSLQAKNGGRPADLQIFHLTSSTYKPFRFELMT 328
            .||.:...|..:.|.||:|.|||.::..|:|...      .||....::|:||....|..:..|.
Human   281 FLRAIKATPMAVADVIPVDTVVNLMLAVGWYTAV------HRPKSTLVYHITSGNMNPCNWHKMG 339

  Fly   329 DKINSYLHDYPLNSAVWYPNLRLVKSLWVFRLSAILFHFIPAIILDLVTKIGGGRPILVRLHKNV 393
            .::.:.....|.......||.....:.:..:....:.|..||||.|...::.|.:|.:.:|...:
Human   340 VQVLATFEKIPFERPFRRPNANFTSNSFTSQYWNAVSHRAPAIIYDCYLRLTGRKPRMTKLMNRL 404

  Fly   394 WNSLNTLEKFIFTEWHFDSKRLLALSKTLNIVDKKKFFIDIGELAWDEYFSNTILGVRQYLSKEP 458
            ..:::.||.||...|.:.:.....|...|:..|::.|..|:.:|.|.||..|.:|||::||.||.
Human   405 LRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKED 469

  Fly   459 IKNLEKARRKDKILLGLHVALQLSFWYGVFKLIVCLTGISTAKAALVLPVLYYL 512
            :..:.||:::.|.|..:|.....:.:...::|::       |::.:...|.:::
Human   470 MAGIPKAKQRLKRLRNIHYLFNTALFLIAWRLLI-------ARSQMARNVWFFI 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8306NP_611140.3 PLN02996 6..456 CDD:215538 150/449 (33%)
FAR-N_SDR_e 13..339 CDD:187547 114/325 (35%)
FAR_C 364..454 CDD:176924 27/89 (30%)
FAR2XP_011519049.1 PLN02996 22..467 CDD:215538 151/451 (33%)
FAR-N_SDR_e 31..335 CDD:187547 113/310 (36%)
Sterile 377..467 CDD:281068 29/89 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157512
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56516
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.760

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