DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8306 and CG12268

DIOPT Version :9

Sequence 1:NP_611140.3 Gene:CG8306 / 36857 FlyBaseID:FBgn0034142 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001247272.1 Gene:CG12268 / 42833 FlyBaseID:FBgn0039131 Length:531 Species:Drosophila melanogaster


Alignment Length:495 Identity:176/495 - (35%)
Similarity:277/495 - (55%) Gaps:22/495 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SPITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEELKKNSVFD 68
            |.|..|||.:.:.|||||||:|..:||||||...::..:|||:|.|||.....|.|:..|..:|.
  Fly    13 SDIAKFYANKTILITGATGFMGKVLVEKLLRSCADLNVIYLLIRTKKGVDPSVRKEQYFKCVIFG 77

  Fly    69 KFKELQLQSRLSKIVPIEGDVGLEHLGISPKDRQTLIDNVNVVFHSAATLDFFQSLKETTNINLR 133
            |..| :....:.|:..::||:....||:|..|..||..||.||||.||.:.|.|.|:....:|:.
  Fly    78 KLLE-KNPGIVDKVRVVKGDLLEPDLGLSANDTNTLASNVEVVFHCAANVRFDQPLRPMVMMNVV 141

  Fly   134 GTRRVVELCQQIKNLDALVHVSSAYVNAYLTKVEEKLYPAPEDPEKIIQLSETLNDDALKELEPK 198
            ||.:|:.|.:::..|.||||||::|.....:.:||:.||||::|..||::.||::|:||.|:.||
  Fly   142 GTLKVLRLAEKMSQLQALVHVSTSYCQCNESVLEERAYPAPQNPFSIIEMVETMDDEALAEITPK 206

  Fly   199 LLKDHPNTYTFTKHLAEHEVANVASKFPCGIVRPSMITAAWKEPIPGWTISKNGPQGFFMGASKG 263
            ||...||||.::|.|:|..:....:|.|..|.|||::|||..||:|||....|||.|..:||::|
  Fly   207 LLNGLPNTYAYSKALSEDLICRYNNKLPIIITRPSIVTAAIHEPLPGWIEGVNGPTGLMIGAARG 271

  Fly   264 VLRRLPLDPSIIMDYIPIDVVVNGIITTGYYVNSLQAKNGGRPADLQIFHLTSSTYKPFRFELMT 328
            |:|.:..:|......||:|..:||:|..||.......:.|.:...::..:|..|:.     .||:
  Fly   272 VIRSMHCNPDYASTVIPVDKAINGMILCGYQRGKASQEKGNKQTGVEFCNLCISSK-----ALMS 331

  Fly   329 --DKINS---YLHDYPLNSAVWYPNLRLVKSLWVFRLSAILFHFIPAIILDLVTKIGGGRPILVR 388
              |.|.:   :.::.||:.|:|||...:.|:.:......|.||::||..:|....:.|.:|.|:.
  Fly   332 WGDSIETGRRFFYETPLSFALWYPGGSIKKNYYHHLFCVIFFHYLPAYFIDFWLLVFGQKPFLLN 396

  Fly   389 LHKNVWNSLNTLEKFIFTEWHFDSKRLLALSKTLNIVDKKKFFIDIGELAWDEYFSNTILGVRQY 453
            :.:.|...|..|:.:....|.|.::|...:|..|:::|:..|...:|::.|:.|.||.|:|:|.|
  Fly   397 VQRKVSMGLKLLQYYTTKRWEFRNERFQEMSSQLSLLDQDLFDTSVGQVNWETYISNYIVGMRTY 461

  Fly   454 LSKEPIKNLEKARRKDKILLGLHVA--------LQLSFWY 485
            :..|....|.:||   |:|..|::.        ..||||:
  Fly   462 ILGESEDTLPQAR---KVLRRLYILDWVSKVLFFSLSFWF 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8306NP_611140.3 PLN02996 6..456 CDD:215538 164/454 (36%)
FAR-N_SDR_e 13..339 CDD:187547 125/330 (38%)
FAR_C 364..454 CDD:176924 26/89 (29%)
CG12268NP_001247272.1 PLN02996 12..463 CDD:215538 165/455 (36%)
FAR-N_SDR_e 22..347 CDD:187547 125/330 (38%)
FAR_C 372..463 CDD:176924 27/90 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466807
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
109.900

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