DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8306 and CG17560

DIOPT Version :9

Sequence 1:NP_611140.3 Gene:CG8306 / 36857 FlyBaseID:FBgn0034142 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_650567.1 Gene:CG17560 / 42022 FlyBaseID:FBgn0038450 Length:499 Species:Drosophila melanogaster


Alignment Length:515 Identity:164/515 - (31%)
Similarity:269/515 - (52%) Gaps:44/515 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SPITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEELKKNSVFD 68
            |.|..|:..:.||:||.|||:|..|:||||| ...|..:|.|:|.|:|..:::|:....|:.|| 
  Fly     3 SEIQGFFKNKTVFLTGGTGFLGKVIIEKLLR-TTEVNRIYSLIRPKRGVPIEDRITTWAKDPVF- 65

  Fly    69 KFKELQLQSR---LSKIVPIEGDVGLEHLGISPKDRQTLIDNVNVVFHSAATLDFFQSLKETTNI 130
               |:.|:::   |.::.||.||.....||||..|::.|...|.:|.|.|||:.|.::|..:..|
  Fly    66 ---EVLLRTKPDALQRVCPIAGDCLDPDLGISQSDQRILTAEVQIVIHGAATVRFDEALHISLAI 127

  Fly   131 NLRGTRRVVELCQQIKNLDALVHVSSAYVNAYLTKVEEKLYPAPED--PEKIIQLSETLNDDALK 193
            |:|.||.:::|.:|:..|.:.||||:||.|..:..:.|:.||...:  .:||:.:.|.:::..|.
  Fly   128 NVRATRLMLQLAKQMTQLVSFVHVSTAYSNCVVHDIAERFYPEHLNCSSDKILAVGELVSNKLLD 192

  Fly   194 ELEPKLLKDHPNTYTFTKHLAEHEVANVASKFPCGIVRPSMITAAWKEPIPGWTISKNGPQGFFM 258
            .:||.|:...|||||:||.|||..:...|...|..|.||::|.:.:|||:.||..:..||.....
  Fly   193 AMEPSLVGSFPNTYTYTKALAEDVILREAGNLPLSIFRPAIIMSTYKEPLVGWVDNLFGPLALCF 257

  Fly   259 GASKGVLRRLPLDPSIIMDYIPIDVVVNGIITTGYYVNSLQAKNGGRPADLQIFHLTSS---TYK 320
            |.::|::|...:|||..:..:|.|..||..:...:....:..:||         .:|:.   .:.
  Fly   258 GGARGIMRVTTVDPSAKISLVPADYCVNVALACAWRTAEISVQNG---------KVTTPPIYAFA 313

  Fly   321 PFRFELMT--DKINS---YLHDYPLNSAVWYPNLRLVKSLWVFRLSAILFHFIPAIILDLVTKIG 380
            |....||:  :.|.|   |....||...:|||.:..:.:..:|.|:|...|.:|....||:.::.
  Fly   314 PSENNLMSYGNFIKSSIIYRDIIPLTKMLWYPFVLCISTTSLFPLAAFFLHTLPGYFFDLLLRLK 378

  Fly   381 GGRPILVRLHKNVWNSLNTLEKFIFTEWHFDSKRLLALSKTLNIVDKKKFFIDIGELAWDEYFSN 445
            |.:||||.|::.:..::..|..|..|.|:||....:.|.:.::..|:..:..|:.:|.|::||..
  Fly   379 GRKPILVDLYRKIHKNIAVLGPFSSTTWNFDMTNTMELREAMSKQDRNLYDFDMAQLDWNDYFKA 443

  Fly   446 TILGVRQYLSKEP------IKNLEKARRKDKILLGLH-------VALQLSFWYGVFKLIV 492
            .:.|:|.|:.||.      .|.| |.|.:.|:   ||       |||.....|.:.:|:|
  Fly   444 AMYGMRLYIGKEKPTAESIAKGL-KLRMRLKV---LHYAFASSLVALAGYILYSLARLVV 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8306NP_611140.3 PLN02996 6..456 CDD:215538 148/462 (32%)
FAR-N_SDR_e 13..339 CDD:187547 112/338 (33%)
FAR_C 364..454 CDD:176924 25/89 (28%)
CG17560NP_650567.1 PLN02996 1..441 CDD:215538 144/451 (32%)
FAR-N_SDR_e 12..327 CDD:187547 109/328 (33%)
Sterile 364..454 CDD:281068 26/89 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466811
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
109.900

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