DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8306 and CG5065

DIOPT Version :9

Sequence 1:NP_611140.3 Gene:CG8306 / 36857 FlyBaseID:FBgn0034142 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001163168.1 Gene:CG5065 / 36860 FlyBaseID:FBgn0034145 Length:625 Species:Drosophila melanogaster


Alignment Length:492 Identity:187/492 - (38%)
Similarity:286/492 - (58%) Gaps:20/492 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEELKKNSVFDK 69
            ||..|||||:|||||.|||:|..:||||||..|.:..:|||:|.|:|:.|..||.||....:|:.
  Fly   118 PIAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAPLFES 182

  Fly    70 FKELQLQSRLSKIVPIEGDVGLEHLGISPKDRQTLIDNVNVVFHSAATLDFFQSLKETTNINLRG 134
            .:: :....|||::||.||:..|.||||.||:..|..||:||||||||:.|.:.||.:..||:.|
  Fly   183 LRQ-EKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKLSVTINMLG 246

  Fly   135 TRRVVELCQQIKNLDALVHVSSAYVNAYLTKVEEKLYPAPEDPEKIIQLSETLNDDALKELEPKL 199
            |:|:||||.::.:||||:|||:||.|...|.|.|.:|..|.:|:.||.|...|.:|.|.:|.|:|
  Fly   247 TKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWLPEDILDQLTPRL 311

  Fly   200 LKDHPNTYTFTKHLAEHEVANVASKFPCGIVRPSMITAAWKEPIPGWTISKNGPQGFFMGASKGV 264
            :...||||||||.||||.:...|...|..|||||::||:..||..||..:.|||.|.....:||:
  Fly   312 IGKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGM 376

  Fly   265 LRRLPLDPSIIMDYIPIDVVVNGIITTGYYVNSLQAKNGGRPADLQIFHLTSSTYKPFRFELMTD 329
            .|.:..:.:.:.|.:|:|:|:|.:|...:...:.::.|      |.|::..:....|..:.....
  Fly   377 FRTMMCEKNYVADMVPVDIVINLMIAAAWRTATRKSNN------LLIYNCCTGQRNPIIWSEFVK 435

  Fly   330 KINSYLHDYPLNSAVWYP--NLRLVKSLWVFRLSAILFHFIPAIILDLVTKIGGGRPILVRLHKN 392
            ...:.:..:||...:|||  :||:.:.:  ..|:.|..||:||.|||.|.:|.|.:|.:|.:...
  Fly   436 HAMTSVRKHPLEGCLWYPTGDLRMNRPM--NTLNCIAKHFLPAYILDGVARIMGKKPFVVNVQNK 498

  Fly   393 VWNSLNTLEKFIFTEWHFDSKRLLALSKTLNIVDKKKFFIDIGELAWDEYFSNTILGVRQYLSKE 457
            :..::..||.|...:|.|....:.||..||:..|::.|..|:..:.||:|....:||.|::|.|:
  Fly   499 IAKAVECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVERYVLGFREFLFKQ 563

  Fly   458 PIKNLEKARRKDKILLGLHVALQLSFWYGVFKLIVCL 494
            ..::|..:|::         .|:|.:.:.:.||:..|
  Fly   564 RPESLPASRKR---------MLRLYYLHQLTKLVAVL 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8306NP_611140.3 PLN02996 6..456 CDD:215538 178/451 (39%)
FAR-N_SDR_e 13..339 CDD:187547 133/325 (41%)
FAR_C 364..454 CDD:176924 30/89 (34%)
CG5065NP_001163168.1 FAR-N_SDR_e 126..445 CDD:187547 133/325 (41%)
Sterile 472..562 CDD:281068 31/89 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466828
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
109.900

Return to query results.
Submit another query.