DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8306 and Sgp

DIOPT Version :9

Sequence 1:NP_611140.3 Gene:CG8306 / 36857 FlyBaseID:FBgn0034142 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001260257.1 Gene:Sgp / 34188 FlyBaseID:FBgn0032055 Length:523 Species:Drosophila melanogaster


Alignment Length:511 Identity:166/511 - (32%)
Similarity:268/511 - (52%) Gaps:34/511 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEELKKNSVFDKF 70
            |..||..::||:||.|||:|..|:|||||.. :|..:|||:|.||.::|:.|.:..|...||   
  Fly     5 ILQFYKDKSVFVTGGTGFLGKVIIEKLLRST-DVRRVYLLVRPKKNETVEGRFQAWKDEPVF--- 65

  Fly    71 KELQLQSR---LSKIVPIEGDVGLEHLGISPKDRQTLIDNVNVVFHSAATLDFFQSLKETTNINL 132
             ::.|:::   |..:.||.||.....||:|..||:.:..:|.|:.||||::.|.:.|:...|||.
  Fly    66 -KILLKAKPEALKLVTPISGDCSEPGLGLSDGDRRMVTADVQVIIHSAASIRFVEPLQRALNINT 129

  Fly   133 RGTRRVVELCQQIKNLDALVHVSSAYVNAYLTKVEEKLYP----APEDPEKIIQLSETLNDDALK 193
            |.||.:::|.:::|.|:|.||:|:|:.|.....:||:.||    .|  ..|:::.:|||:.|.|.
  Fly   130 RATRLMIQLAKEMKGLEAFVHISTAFSNCPSQHIEERFYPEHLTCP--AAKVLEFNETLSPDLLD 192

  Fly   194 ELEPKLLKDHPNTYTFTKHLAEHEVANVASKFPCGIVRPSMITAAWKEPIPGWTISKNGPQGFFM 258
            ::.|.|:...|||||:||.|||..:.......|..:.||::|.|.:|||:.||..:.:|......
  Fly   193 KMAPALMGKFPNTYTYTKALAEQVIQMEGQDLPICVFRPAIILANFKEPMSGWIDNLHGVVALIY 257

  Fly   259 GASKGVLRRLPLDPSIIMDYIPIDVVVNGIITTGYYVNSLQAKNGGRPADLQIFHLTSSTYKPFR 323
            |.:.|:||.|.::|......:|.|...|..:.:|:.|    |||....:..|:    ::...|..
  Fly   258 GNTYGILRLLYVNPKADAIIVPGDYCANVALASGWQV----AKNSESRSSSQL----AAKKPPPI 314

  Fly   324 FELMTDKINS------------YLHDYPLNSAVWYPNLRLVKSLWVFRLSAILFHFIPAIILDLV 376
            :.|.|.|.||            :.|..|:...:|||........|:|:|..|.:|.||....||:
  Fly   315 YTLATTKSNSITFGKAVKLGIHHNHTIPVTKTIWYPFAHFTTCPWLFKLGCIFYHLIPGFFFDLL 379

  Fly   377 TKIGGGRPILVRLHKNVWNSLNTLEKFIFTEWHFDSKRLLALSKTLNIVDKKKFFIDIGELAWDE 441
            .:|.|.:|||:|.::.:...|..|..|....:..|......|..:::..|:..|..|:..|.|:|
  Fly   380 LRIQGKKPILMRSYQKIHEVLLLLFPFNGKTYEMDMNNTNQLWDSMSPEDRSIFPFDMATLNWEE 444

  Fly   442 YFSNTILGVRQYLSKEPIKNLEKARRKDKILLGLHVALQLSFWYGVFKLIVCLTGI 497
            ||:..:.|:|.:|.||....||:|:::......||.:|||.....:.|::..|..:
  Fly   445 YFTRILSGMRVFLYKESWDTLEQAKKRLFRFYILHRSLQLVLCLALGKIVWILYSV 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8306NP_611140.3 PLN02996 6..456 CDD:215538 154/468 (33%)
FAR-N_SDR_e 13..339 CDD:187547 116/344 (34%)
FAR_C 364..454 CDD:176924 26/89 (29%)
SgpNP_001260257.1 PLN02996 1..449 CDD:215538 151/458 (33%)
FAR-N_SDR_e 12..333 CDD:187547 115/335 (34%)
FAR_C 367..457 CDD:176924 26/89 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466814
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
109.900

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