DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8306 and fard-1

DIOPT Version :9

Sequence 1:NP_611140.3 Gene:CG8306 / 36857 FlyBaseID:FBgn0034142 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001370741.1 Gene:fard-1 / 180582 WormBaseID:WBGene00022200 Length:536 Species:Caenorhabditis elegans


Alignment Length:499 Identity:172/499 - (34%)
Similarity:279/499 - (55%) Gaps:17/499 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASSPITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEELKKNS 65
            ||.| :.|.|||.:|.:||.|||:|..||||||..:.::..:||::|.:|||:.||||..|..:.
 Worm     1 MAFS-VRDVYAGSSVLLTGGTGFLGKVIVEKLLWTIDDIQNIYLMIRTRKGKNPQERLSGLLHDP 64

  Fly    66 VFDKFKELQLQSRLSKIVPIEGDVGLEHLGISPKDRQTLIDNVNVVFHSAATLDFFQSLKETTNI 130
            :|::.:: :......|:..|.||:.:|:||:.|:|...:.||||||.|||||:.|.:.|:....:
 Worm    65 LFNRIRQ-EKPEAFDKLKAIGGDMMVENLGMDPEDVMLIRDNVNVVIHSAATVKFDEHLRAAVTM 128

  Fly   131 NLRGTRRVVELCQQIKNLDALVHVSSAYVNAYLTKVEEKLYPAPEDPEKIIQLSETLNDDALKEL 195
            |:.||:|:::||.|||:|..|||||:||.|....:..||:|.:|..|:|::.....::|:.|.::
 Worm   129 NVIGTKRIIDLCHQIKDLKVLVHVSTAYANCDRFETTEKIYKSPMAPQKLVDALSWMDDETLTKI 193

  Fly   196 EPKLLKDHPNTYTFTKHLAEHEVANVASKFPCGIVRPSMITAAWKEPIPGWTISKNGPQGFFMGA 260
            .||:|...|||||.||.|||..:...|...|..|:|||::.|.|:.|:||||.:.|||.|.|...
 Worm   194 TPKILGLRPNTYTLTKALAESTIETEAKDIPVIIIRPSIVGAMWQGPLPGWTDNINGPTGIFAAV 258

  Fly   261 SKGVLRRLPLDPSIIMDYIPIDVVVNGIITTGYYVNSLQAKNGGRPADLQIFHLTSSTYKPFRFE 325
            .:|||..:........|.||:|:|.|.||.:..|..|:..      .::.:.|.:|....|..:.
 Worm   259 GRGVLTNMCGSSESKADIIPVDIVANMIIASASYRTSINT------TEIPVIHCSSGELNPLYWG 317

  Fly   326 LMTDKINSYLHDYPLNSAVWYPNLRLVKSLWVFRLSAILFHFIPAIILDLVTKIGGGRPILVRLH 390
            .:...:..:...||:......|:....||..:|.::..:.|.|||.|.|:..::.|.|...|:|:
 Worm   318 HIVLFLEQFYKKYPMEQCFAVPSTYFHKSRSLFLINYYIKHHIPAAISDISARLIGKRKNNVKLY 382

  Fly   391 KNVWNSLNTLEKFIFTEWHFDSKRLLALSKTLNIVDKKKFFIDIGELAWDEYFSNTILGVRQYLS 455
            ..||..:.||..|....|.|:::.|....:.:...|:|::..|:.::.|:.|..:.::|::::|.
 Worm   383 SKVWKMIETLHFFTTRGWSFNARGLPEFFEKMTPADQKEYNFDVRQVDWNSYLFDYVMGIKKFLL 447

  Fly   456 KEPIKNLEKARRKDKILLGLHVALQLSFWYGVFKLIVCLTGIST 499
            ||.::||.::|..   ||.:.:..|      |...||....|||
 Worm   448 KENLENLNRSRAH---LLKMRIRRQ------VIAAIVYAGFIST 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8306NP_611140.3 PLN02996 6..456 CDD:215538 155/449 (35%)
FAR-N_SDR_e 13..339 CDD:187547 120/325 (37%)
FAR_C 364..454 CDD:176924 24/89 (27%)
fard-1NP_001370741.1 FAR-N_SDR_e 13..331 CDD:187547 120/324 (37%)
Sterile 358..448 CDD:397244 25/89 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165462
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56516
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.860

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