DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8306 and Hsd3b1

DIOPT Version :9

Sequence 1:NP_611140.3 Gene:CG8306 / 36857 FlyBaseID:FBgn0034142 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001291729.1 Gene:Hsd3b1 / 15492 MGIID:96233 Length:373 Species:Mus musculus


Alignment Length:510 Identity:107/510 - (20%)
Similarity:180/510 - (35%) Gaps:199/510 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQE--RLEELKKNSVFDKFKEL 73
            ||.:..:|||.||||..|::.|:::                |.:||  .|:::.:....::|.:|
Mouse     2 AGWSCLVTGAGGFVGQRIIKMLVQE----------------KELQEVRALDKVFRPETKEEFSKL 50

  Fly    74 QLQSRLSKIVPIEGDVGLEHLGISPKDRQTL---IDNVNVVFHSAATLDFFQSLKETT--NINLR 133
            |.:   :|:..:|||:         .|.|.|   ...::||.|:||.:|....:...|  ::||:
Mouse    51 QTK---TKVTVLEGDI---------LDAQCLRRACQGISVVIHTAAVIDVTGVIPRQTILDVNLK 103

  Fly   134 GTRRVVELCQQIKNLDALVHVSSAYVNAYLTKVEEKLYPAPEDPEKIIQLSETLNDDALKELEPK 198
            ||:.::|.|.| .::.|.:..||..|            ..|...:||:             |...
Mouse   104 GTQNLLEACVQ-ASVPAFIFCSSVDV------------AGPNSYKKIV-------------LNGH 142

  Fly   199 LLKDHPNT----YTFTKHLAEHEV--ANVASKFPCGIVRPSMITAAWKEPIPGWTISKNGPQGFF 257
            ..::|.:|    |.::|.:||..|  ||           .||:              |||     
Mouse   143 EEQNHESTWSDPYPYSKKMAEKAVLAAN-----------GSML--------------KNG----- 177

  Fly   258 MGASKGVLRRLPLDPSIIM-DYIPIDVVVNGII----------TTGYY--VNSLQAKNGGRPADL 309
                 |.|....|.|..|. :..|.  :.|.||          .||.:  .|.:..:|      :
Mouse   178 -----GTLNTCALRPMYIYGERSPF--IFNAIIRALKNKGILCVTGKFSIANPVYVEN------V 229

  Fly   310 QIFHLTS---------STYKPFRFELMTDKINSYLHD---YPLN-------SAVWYPNLRLVKSL 355
            ...|:.:         ||....:|..::|......:|   |.|:       :|.|  :|.|....
Mouse   230 AWAHILAARGLRDPKKSTSIQGQFYYISDDTPHQSYDDLNYTLSKEWGLRPNASW--SLPLPLLY 292

  Fly   356 WV-FRLSAILFHFIPAIILDLVTKIGGGRPILVRLHKNVWNSLNTLEKFIFTEWHFDSKRLLALS 419
            |: |.|..:.|         |:..:...||:.                         ::.|:.||
Mouse   293 WLAFLLETVSF---------LLRPVYRYRPLF-------------------------NRHLITLS 323

  Fly   420 KTLNIVDKKKFFIDIGELAWDEYFSNTILGVRQYLSKEPIKNLEKARRKDKILLG 474
            .:......||...|:|                    .||:.|.|:|::|....:|
Mouse   324 NSTFTFSYKKAQRDLG--------------------YEPLVNWEEAKQKTSEWIG 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8306NP_611140.3 PLN02996 6..456 CDD:215538 100/490 (20%)
FAR-N_SDR_e 13..339 CDD:187547 78/363 (21%)
FAR_C 364..454 CDD:176924 11/89 (12%)
Hsd3b1NP_001291729.1 NADB_Rossmann 5..357 CDD:389744 104/504 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3985
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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