DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpLP2 and rpp202

DIOPT Version :9

Sequence 1:NP_523764.1 Gene:RpLP2 / 36855 FlyBaseID:FBgn0003274 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_595873.1 Gene:rpp202 / 2540587 PomBaseID:SPBC23G7.15c Length:110 Species:Schizosaccharomyces pombe


Alignment Length:113 Identity:59/113 - (52%)
Similarity:79/113 - (69%) Gaps:3/113 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSM 65
            |:|:|||||..:|||.||:.||:|.:||:||:|.:|||:..:|.||.||:|::||..|.||||::
pombe     1 MKYLAAYLLLTVGGKQSPSASDIESVLSTVGIEAEAERVESLISELNGKNIEELIAAGNEKLSTV 65

  Fly    66 PVGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
            |..|..|..||..|..|.|....:|||:||..|||   |:||||.||:
pombe    66 PSAGAVATPAAGGAAGAEATSAAEEAKEEEAAEES---DEDMGFGLFD 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpLP2NP_523764.1 Ribosomal_P2 1..>65 CDD:100111 36/63 (57%)
rpp202NP_595873.1 Ribosomal_P2 1..110 CDD:100111 58/111 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 98 1.000 Domainoid score I1868
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 124 1.000 Inparanoid score I1463
OMA 1 1.010 - - QHG53848
OrthoFinder 1 1.000 - - FOG0000927
OrthoInspector 1 1.000 - - otm47340
orthoMCL 1 0.900 - - OOG6_100883
Panther 1 1.100 - - O PTHR21141
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1147
SonicParanoid 1 1.000 - - X755
TreeFam 00.000 Not matched by this tool.
1111.000

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