DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and CDC28

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_009718.3 Gene:CDC28 / 852457 SGDID:S000000364 Length:298 Species:Saccharomyces cerevisiae


Alignment Length:302 Identity:128/302 - (42%)
Similarity:181/302 - (59%) Gaps:15/302 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GDPFNYQELNIIGEGAYGTVYRARDVITG---NIVALKKVRISLNENGVPMSTLREISLLKQLNA 82
            |:..||:.|..:|||.||.||:|.|:..|   .:|||||:|:...:.|||.:.:|||||||:|..
Yeast     3 GELANYKRLEKVGEGTYGVVYKALDLRPGQGQRVVALKKIRLESEDEGVPSTAIREISLLKELKD 67

  Fly    83 SNHANIVKLYEVCQFLERDGQLLILLVFEHVEQDLSDLIDRLPK-SGMSPPTIQRLSRELLTGVD 146
            .   |||:||::   :..|...| .||||.::.||...::.:|| ..:....:::...:|..|:.
Yeast    68 D---NIVRLYDI---VHSDAHKL-YLVFEFLDLDLKRYMEGIPKDQPLGADIVKKFMMQLCKGIA 125

  Fly   147 FLHSHRIIHRDLKPQNLLVSSQGHLKIADFGLAKTYGSEMK-LTSVVVTLWYRAPEVLL-AQPYN 209
            :.|||||:||||||||||::..|:||:.|||||:.:|..:: .|..:|||||||||||| .:.|:
Yeast   126 YCHSHRILHRDLKPQNLLINKDGNLKLGDFGLARAFGVPLRAYTHEIVTLWYRAPEVLLGGKQYS 190

  Fly   210 STVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVA--LEHFPQRHPK 272
            :.||.||..||..||.||:.:|.|.||.:|:.:||.:.|.|.|..||..:.:.  ...|||...|
Yeast   191 TGVDTWSIGCIFAEMCNRKPIFSGDSEIDQIFKIFRVLGTPNEAIWPDIVYLPDFKPSFPQWRRK 255

  Fly   273 RPKDFCPHLCKYADDLLNKMLSYDLHLRPSALACLEHDYFQQ 314
            ......|.|.....|||:|:|:||...|.||.....|.|||:
Yeast   256 DLSQVVPSLDPRGIDLLDKLLAYDPINRISARRAAIHPYFQE 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 123/293 (42%)
CDC28NP_009718.3 STKc_CDK1_CdkB_like 8..295 CDD:270829 123/293 (42%)

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