DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and AT1G54610

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_175862.1 Gene:AT1G54610 / 841903 AraportID:AT1G54610 Length:572 Species:Arabidopsis thaliana


Alignment Length:312 Identity:116/312 - (37%)
Similarity:175/312 - (56%) Gaps:44/312 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YQELNIIGEGAYGTVYRARDVITGNIVALKKVRISLNENGVPMST---LREISLLKQLNASNHAN 87
            :::::.||:|.|..||:|:|::||.||||||||.   :|..|.|.   .|||.:|::|   :|.|
plant   118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRF---DNLEPESVKFMAREILVLRRL---DHPN 176

  Fly    88 IVKLYEVCQFLERDGQLL------ILLVFEHVEQDLSDLIDRLPKSGMSPPTIQRLSRELLTGVD 146
            :|||         :|.:.      :.|||::::.||:.|... |....|...::.|.|:|::|::
plant   177 VVKL---------EGLVTSRMSCSLYLVFQYMDHDLAGLASS-PVVKFSESEVKCLMRQLISGLE 231

  Fly   147 FLHSHRIIHRDLKPQNLLVSSQGHLKIADFGLAKTYGSEMK--LTSVVVTLWYRAPEVLL-AQPY 208
            ..||..::|||:|..|||:...|.|||||||||..:....|  :||.||||||||||:|| |..|
plant   232 HCHSRGVLHRDIKGSNLLIDDGGVLKIADFGLATIFDPNHKRPMTSRVVTLWYRAPELLLGATDY 296

  Fly   209 NSTVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVALEHFPQRHPKR 273
            ...:|:|||.||:.|:...|.:.||.:|..||.:|::|.|.|:|..|.:.   ...|.....|:.
plant   297 GVGIDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSEDYWKKG---KFTHGAIYKPRE 358

  Fly   274 P---------KDFCPHLCKYADDLLNKMLSYDLHLRPSALACLEHDYFQQEP 316
            |         |||.|.    :..|::.:||.:...|.:|.|.|:.::|..||
plant   359 PYKRSIRETFKDFPPS----SLPLIDALLSIEPEDRQTASAALKSEFFTSEP 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 113/306 (37%)
AT1G54610NP_175862.1 STKc_CDK9_like 118..402 CDD:270832 113/306 (37%)

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