DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and CDKC;1

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_196589.1 Gene:CDKC;1 / 830891 AraportID:AT5G10270 Length:505 Species:Arabidopsis thaliana


Alignment Length:312 Identity:122/312 - (39%)
Similarity:189/312 - (60%) Gaps:27/312 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YQELNIIGEGAYGTVYRARDVITGNIVALKKVRISLNENGVPMSTLREISLLKQLNASNHANIVK 90
            :::|..||||.||.||.|:::.||.||||||:|:.....|.|::.:|||.:||:|   :|.|:::
plant    26 FEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKL---HHENVIQ 87

  Fly    91 LYEVCQFLERD--------------GQLLILLVFEHVEQDLSDLIDRLPKSGMSPPTIQRLSREL 141
            |.|:.....||              |   |.:|||:::.||:.|.|| |....:.|.|:...::|
plant    88 LKEIVTSPGRDRDDQGKPDNNKYKGG---IYMVFEYMDHDLTGLADR-PGLRFTVPQIKCYMKQL 148

  Fly   142 LTGVDFLHSHRIIHRDLKPQNLLVSSQGHLKIADFGLAKTYGSEM--KLTSVVVTLWYRAPEVLL 204
            |||:.:.|.::::|||:|..|||:.::|:||:||||||::|..:.  .||:.|:|||||.||:||
plant   149 LTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLL 213

  Fly   205 -AQPYNSTVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVA-LEHFP 267
             |..|...:|:||..||..|:.:.:.:.||.:|:.||::||||.|.|.|:.||....:. ..:|.
plant   214 GATKYGPAIDMWSVGCIFAELLHAKPILPGKNEQEQLNKIFELCGSPDEKLWPGVSKMPWFNNFK 278

  Fly   268 QRHP--KRPKDFCPHLCKYADDLLNKMLSYDLHLRPSALACLEHDYFQQEPL 317
            ...|  :|.::|..|..::|.:||.|||..|...|.||...|:.:||..:||
plant   279 PARPLKRRVREFFRHFDRHALELLEKMLVLDPAQRISAKDALDAEYFWTDPL 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 118/305 (39%)
CDKC;1NP_196589.1 STKc_CDK9_like 26..325 CDD:270832 118/305 (39%)

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