DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and CDC2

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_566911.1 Gene:CDC2 / 824036 AraportID:AT3G48750 Length:294 Species:Arabidopsis thaliana


Alignment Length:293 Identity:129/293 - (44%)
Similarity:182/293 - (62%) Gaps:13/293 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YQELNIIGEGAYGTVYRARDVITGNIVALKKVRISLNENGVPMSTLREISLLKQLNASNHANIVK 90
            |:::..||||.||.||:|||.:|...:||||:|:...:.|||.:.:|||||||::   .|:||||
plant     4 YEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM---QHSNIVK 65

  Fly    91 LYEVCQFLERDGQLLILLVFEHVEQDLSDLIDRLPKSGMSPPTIQRLSRELLTGVDFLHSHRIIH 155
            |.:|....:|     :.||||:::.||...:|..|........|:....::|.|:.:.||||::|
plant    66 LQDVVHSEKR-----LYLVFEYLDLDLKKHMDSTPDFSKDLHMIKTYLYQILRGIAYCHSHRVLH 125

  Fly   156 RDLKPQNLLVSSQ-GHLKIADFGLAKTYGSEMK-LTSVVVTLWYRAPEVLL-AQPYNSTVDIWSA 217
            |||||||||:..: ..||:||||||:.:|..:: .|..||||||||||:|| :..|::.|||||.
plant   126 RDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSHHYSTPVDIWSV 190

  Fly   218 ACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVA--LEHFPQRHPKRPKDFCPH 280
            .||..||.:::.||||.||.:||.:||.:.|.|.|..|....|:.  ...||:..|...:.|.|:
plant   191 GCIFAEMISQKPLFPGDSEIDQLFKIFRIMGTPYEDTWRGVTSLPDYKSAFPKWKPTDLETFVPN 255

  Fly   281 LCKYADDLLNKMLSYDLHLRPSALACLEHDYFQ 313
            |.....|||:|||..|...|.:|.|.|||:||:
plant   256 LDPDGVDLLSKMLLMDPTKRINARAALEHEYFK 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 127/290 (44%)
CDC2NP_566911.1 PLN00009 1..294 CDD:177649 129/293 (44%)

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