DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk4 and cdk1

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_997729.1 Gene:cdk1 / 80973 ZFINID:ZDB-GENE-010320-1 Length:302 Species:Danio rerio


Alignment Length:296 Identity:128/296 - (43%)
Similarity:177/296 - (59%) Gaps:19/296 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NYQELNIIGEGAYGTVYRARDVITGNIVALKKVRISLNENGVPMSTLREISLLKQLNASNHANIV 89
            :|.::..||||.||.||:.|:..||.:||:||:|:...|.|||.:.:|||||||:|   .|.|:|
Zfish     3 DYLKIEKIGEGTYGVVYKGRNKTTGQVVAMKKIRLESEEEGVPSTAVREISLLKEL---QHPNVV 64

  Fly    90 KLYEVCQFLERDGQLLILLVFEHVEQDLSDLIDRLPKSG--MSPPTIQRLSRELLTGVDFLHSHR 152
            :|.:|   |.::.:|  .||||.:..||...:|.:| ||  |.|..::....::|.|:.|.|..|
Zfish    65 RLLDV---LMQESKL--YLVFEFLSMDLKKYLDSIP-SGEFMDPMLVKSYLYQILEGILFCHCRR 123

  Fly   153 IIHRDLKPQNLLVSSQGHLKIADFGLAKTYGSEMKL-TSVVVTLWYRAPEVLL-AQPYNSTVDIW 215
            ::||||||||||:.::|.:|:||||||:.:|..::: |..||||||||||||| |..|::.||:|
Zfish   124 VLHRDLKPQNLLIDNKGVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGASRYSTPVDLW 188

  Fly   216 SAACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVALEHFPQRHPKRPKDFCPH 280
            |...|..|:..::.||.|.||.:||.|||...|.|..:.||...|  |..:....||.......:
Zfish   189 SIGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNEVWPDVES--LPDYKNTFPKWKSGNLAN 251

  Fly   281 LCKYAD----DLLNKMLSYDLHLRPSALACLEHDYF 312
            ..|..|    |||.|||.||...|.||...:.|.||
Zfish   252 TVKNLDKNGIDLLMKMLIYDPPKRISARQAMTHPYF 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 126/293 (43%)
cdk1NP_997729.1 STKc_CDK1_euk 3..287 CDD:270845 126/294 (43%)

Return to query results.
Submit another query.