DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and cdk17

DIOPT Version :9

Sequence 1:NP_001286493.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001188286.1 Gene:cdk17 / 798487 ZFINID:ZDB-GENE-041210-15 Length:526 Species:Danio rerio


Alignment Length:317 Identity:121/317 - (38%)
Similarity:184/317 - (58%) Gaps:27/317 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KRQKMSQAKKFGDGDPFNYQELNIIGEGAYGTVYRARDVITGNIVALKKVRISLNENGVPMSTLR 72
            :|.:.:...:.|.|....|.:|:.:|||.|.||::.|..:|.|:||||::|:. :|.|.|.:.:|
Zfish   177 RRSRRASLSEIGFGKLETYIKLDKLGEGTYATVFKGRSKLTDNLVALKEIRLE-HEEGAPCTAIR 240

  Fly    73 EISLLKQLNASNHANIVKLYEVCQFLERDGQLLILLVFEHVEQDLSDLIDRLPKSGMSPPTIQRL 137
            |:||||.|   .|||||.|:::   :..|..|  .||||::::||...:|..... ||...::..
Zfish   241 EVSLLKDL---KHANIVTLHDI---VHTDKSL--TLVFEYLDKDLKQYMDDCGNI-MSMHNVKIF 296

  Fly   138 SRELLTGVDFLHSHRIIHRDLKPQNLLVSSQGHLKIADFGLA-------KTYGSEMKLTSVVVTL 195
            ..::|.|:.:.|..:::||||||||||::.:|.||:||||||       |||.:|      ||||
Zfish   297 LFQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNE------VVTL 355

  Fly   196 WYRAPEVLL-AQPYNSTVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTI 259
            |||.|:||| :..|::.:|:|...||.:||...|.||||::.:::|..||.|.|.|||..||...
Zfish   356 WYRPPDVLLGSSEYSTQIDMWGVGCIFYEMAAGRPLFPGSTVEDELHLIFRLLGTPTEDNWPGIS 420

  Fly   260 SV---ALEHFPQRHPKRPKDFCPHLCKYADDLLNKMLSYDLHLRPSALACLEHDYFQ 313
            |:   ...:||:..|:...:..|.|.....:||...|.|:...|.||...::|.||:
Zfish   421 SIEEFKSYNFPKYKPQPFINHAPRLDTEGIELLLSFLRYESKKRISADESMKHSYFK 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_001286493.1 STKc_CDK4_6_like 26..312 CDD:270831 116/296 (39%)
S_TKc 26..312 CDD:214567 116/296 (39%)
cdk17NP_001188286.1 STKc_PCTAIRE2 188..496 CDD:143377 120/306 (39%)
PLN00009 192..481 CDD:177649 118/302 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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