DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and cdk5

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_571794.1 Gene:cdk5 / 65234 ZFINID:ZDB-GENE-010131-2 Length:292 Species:Danio rerio


Alignment Length:295 Identity:131/295 - (44%)
Similarity:181/295 - (61%) Gaps:20/295 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YQELNIIGEGAYGTVYRARDVITGNIVALKKVRISLNENGVPMSTLREISLLKQLNASNHANIVK 90
            |::|..||||.||||::|::..|..|||||:||:..::.|||.|.||||.|||:|   .|.|||:
Zfish     4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL---KHKNIVR 65

  Fly    91 LYEVCQFLERDGQLLILLVFEHVEQDLSDLIDRLPKSGMSPPTIQRLSRELLTGVDFLHSHRIIH 155
            |::|   |..|.:|  .||||:.:|||....|.. ...:.|..::....:||.|:.|.||..::|
Zfish    66 LHDV---LHSDKKL--TLVFEYCDQDLKKYFDSC-NGDLDPEIVKSFMYQLLKGLAFCHSRNVLH 124

  Fly   156 RDLKPQNLLVSSQGHLKIADFGLAKTYGSEMKLTSV-VVTLWYRAPEVLL-AQPYNSTVDIWSAA 218
            |||||||||::..|.||:||||||:.:|..::..|. |||||||.|:||. |:.|::::|:|||.
Zfish   125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG 189

  Fly   219 CIIFEMFNR-RALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVALEHFPQRHPKRPK-----DF 277
            ||..|:.|. |.||||....:||.|||.|.|.|||:|| ||::...::.|  :|..|.     :.
Zfish   190 CIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW-QTMNKLPDYKP--YPMYPATTSLVNV 251

  Fly   278 CPHLCKYADDLLNKMLSYDLHLRPSALACLEHDYF 312
            .|.|.....|||..:|..:...|.||...|:|.||
Zfish   252 VPKLSSTGRDLLQNLLKCNPVQRISAEEALQHPYF 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 129/293 (44%)
cdk5NP_571794.1 STKc_CDK5 3..286 CDD:143344 129/293 (44%)

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