DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and cdk9

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:XP_012823646.1 Gene:cdk9 / 448039 XenbaseID:XB-GENE-483721 Length:382 Species:Xenopus tropicalis


Alignment Length:317 Identity:111/317 - (35%)
Similarity:172/317 - (54%) Gaps:30/317 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YQELNIIGEGAYGTVYRARDVITGNIVALKKVRISLNENGVPMSTLREISLLKQLNASNHANIVK 90
            |:.|..||:|.:|.|::|:...||..||||||.:...:.|.|::.||||.:|:.|   .|.|:|.
 Frog    19 YERLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLL---KHENVVN 80

  Fly    91 LYEVCQFLERDGQLL-------------ILLVFEHVEQDLSDLIDRL-PKSGMSPPTIQRLSREL 141
            |.|:|:.......|:             |.|||:..|.||:.|:... .|..:|  .|:::.:.|
 Frog    81 LIEICRTKNSLAHLVSPTANQYNRCKGTIFLVFDFCEHDLAGLLSNAHVKFTLS--EIKKVMQML 143

  Fly   142 LTGVDFLHSHRIIHRDLKPQNLLVSSQGHLKIADFGLAKTY-----GSEMKLTSVVVTLWYRAPE 201
            |.|:.::|.::|:|||:|..|:|::..|.||:||||||:.:     ....|.|:.|||||||.||
 Frog   144 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNKYTNRVVTLWYRPPE 208

  Fly   202 VLLAQ-PYNSTVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVALE- 264
            :||.: .|...:|:|.|.||:.||:.|..:..|.:|::||..|.:|.|..|.:.||......|. 
 Frog   209 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPNVDKYELYQ 273

  Fly   265 --HFPQRHPKRPKDFCPHLCK--YADDLLNKMLSYDLHLRPSALACLEHDYFQQEPL 317
              ..|:...::.|:......|  ||.||::|:|..|...|..:...|.||:|..:|:
 Frog   274 KLELPKGQKRKVKERLKAYVKDLYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPM 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 109/310 (35%)
cdk9XP_012823646.1 STKc_CDK9 6..325 CDD:270848 109/310 (35%)

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