DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and cdk1

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_988908.1 Gene:cdk1 / 394503 XenbaseID:XB-GENE-482750 Length:302 Species:Xenopus tropicalis


Alignment Length:295 Identity:130/295 - (44%)
Similarity:175/295 - (59%) Gaps:19/295 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YQELNIIGEGAYGTVYRARDVITGNIVALKKVRISLNENGVPMSTLREISLLKQLNASNHANIVK 90
            |.::..||||.||.||:.|...||.:||:||:|:...|.|||.:.:|||||||:|   .|.|||.
 Frog     4 YTKIEKIGEGTYGVVYKGRHKATGQVVAMKKIRLENEEEGVPSTAIREISLLKEL---QHPNIVC 65

  Fly    91 LYEVCQFLERDGQLLILLVFEHVEQDLSDLIDRLPKSGMSPPT--IQRLSRELLTGVDFLHSHRI 153
            |.:|   |.:|.:|  .|:||.:..||...:|.:| ||....|  ::....::|.|:.|.||.|:
 Frog    66 LLDV---LMQDSRL--YLIFEFLSMDLKKYLDSIP-SGQYIDTMLVKSYLYQILQGIVFCHSRRV 124

  Fly   154 IHRDLKPQNLLVSSQGHLKIADFGLAKTYGSEMKL-TSVVVTLWYRAPEVLLAQ-PYNSTVDIWS 216
            :||||||||||:.|:|.:|:||||||:.:|..::: |..|||||||||||||.. .|::.||:||
 Frog   125 LHRDLKPQNLLIDSKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSVRYSTPVDVWS 189

  Fly   217 AACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVALEHFPQRHPKRPKDFCPHL 281
            ...|..|:..::.||.|.||.:||.|||...|.|..:.||:..|  |:.:....||.........
 Frog   190 IGTIFAEIATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVES--LQDYKNTFPKWKGGNLSAN 252

  Fly   282 CKYAD----DLLNKMLSYDLHLRPSALACLEHDYF 312
            .|..|    |||:|||.||...|.||...|.|.||
 Frog   253 VKNIDKDGLDLLSKMLIYDPAKRISARKALLHPYF 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 128/293 (44%)
cdk1NP_988908.1 STKc_CDK1_euk 3..287 CDD:270845 128/293 (44%)

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