DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and Cdk8

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster


Alignment Length:356 Identity:118/356 - (33%)
Similarity:179/356 - (50%) Gaps:71/356 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QLKRQKMSQAKKFGDGDPFNYQELNIIGEGAYGTVYRA--RDVITGNIVALKKVRISLNENGVPM 68
            |::|.|:.        |.|||:... :|.|.||.||:|  ::...|...|||::    :..|:.|
  Fly    10 QIERTKVE--------DLFNYEGCK-VGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSM 61

  Fly    69 STLREISLLKQLNASNHANIVKLYEVCQFLERDGQLLILLVFEHVEQDLSDLI--DRLPKSGMSP 131
            |..|||:||::|   .|.|::.|..|  ||..:.:.:.||: ::.|.||..:|  .|..|:....
  Fly    62 SACREIALLREL---KHQNVITLIRV--FLSHNDRKVFLLI-DYAEHDLWHIIKFHRAAKATKKQ 120

  Fly   132 PTIQR-----LSRELLTGVDFLHSHRIIHRDLKPQNLLV----SSQGHLKIADFGLAKTYGSEMK 187
            ..:.|     |..::|.|:.:|||:.::||||||.|:||    :.:|.:||||.|.|:.:.:.:|
  Fly   121 VVVPRGMVKSLLYQILDGIHYLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLK 185

  Fly   188 ----LTSVVVTLWYRAPEVLL-AQPYNSTVDIWSAACIIFEMFNRRALFPGTSE---------KN 238
                |..||||.||||||:|| |:.|...:|||:..||..|:.....:|....|         .:
  Fly   186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 250

  Fly   239 QLDRIFELTGRPTEQQWPQTISVALEHFPQRHPKRPKDF-------CPHLCKY-----------A 285
            ||||||.:.|.|.::.|..     ::..|:.| ...|||       | .|.||           |
  Fly   251 QLDRIFNVMGFPQDKDWED-----IKKMPEHH-TLTKDFKRSTYSTC-SLAKYMERHKIKPDSKA 308

  Fly   286 DDLLNKMLSYDLHLRPSALACLEHDYFQQEP 316
            ..||.|:|..|.:.|.::...::..|||:||
  Fly   309 FHLLQKLLLMDPNKRITSEQAMQDQYFQEEP 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 107/330 (32%)
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 109/333 (33%)

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