DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and p38c

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster


Alignment Length:313 Identity:91/313 - (29%)
Similarity:152/313 - (48%) Gaps:37/313 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PFNYQELNIIGEGAYGTVYRARDVITGNIVALKKVRISLNENGVPMSTLREISLLKQLNASNHAN 87
            |..|:.:..:|.|::|.|.:.|...|.|..|:|::............|.|||.|||.:   ||.|
  Fly    17 PDIYEFVRFLGGGSFGQVAKVRLRGTENYFAMKRLMRPFEREEDAKGTYREIRLLKHM---NHRN 78

  Fly    88 IVKL--------YEVCQFLERDGQLLILLVFEHVEQDLSDLIDRLPKS-GMSPPTIQRLSRELLT 143
            ::.|        :.:.:|.:      :.||...::.||    .|..:| .||...|:.:..::|.
  Fly    79 VISLLNVFHPPAHNMMEFQQ------VYLVTHLMDADL----HRYSRSKRMSDQEIRIILYQILR 133

  Fly   144 GVDFLHSHRIIHRDLKPQNLLVSSQGHLKIADFGLAKTYGSEMKLTSVVVTLWYRAPEVL-LAQP 207
            |:.::||..::||||||.|:.|:....::|.||||::....  |:|..|.|:||.|||:: |...
  Fly   134 GLKYIHSAGVVHRDLKPCNIAVNGNSEVRILDFGLSRMCAD--KMTDHVGTMWYLAPEIIFLRGQ 196

  Fly   208 YNSTVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVALE---HFPQR 269
            |...:|:||..||:.|:...|.||.|.:..:|:..:..:.|.||.:   ....:::|   ::.:.
  Fly   197 YTKAIDVWSVGCILAELITDRVLFRGENYVSQIRCLINIMGTPTRE---FITGISMERSRNYLEG 258

  Fly   270 HPKRPKDFCPHLCKYAD----DLLNKMLSYDLHLRPSALACLEHDYFQQ--EP 316
            :|.|.:....||....|    ||:.|||......|.:|...:.|.|.:.  ||
  Fly   259 YPLRQRCDFHHLFMGYDVQAIDLMEKMLEMVPEKRITAAEAMLHPYLRDLIEP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 87/302 (29%)
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 91/313 (29%)

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