DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and csk1

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_593019.1 Gene:csk1 / 2543327 PomBaseID:SPAC1D4.06C Length:306 Species:Schizosaccharomyces pombe


Alignment Length:291 Identity:73/291 - (25%)
Similarity:134/291 - (46%) Gaps:47/291 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GTVYRARDVITGNIVALKKVRISLNENGV-----PMSTLREISLLKQLNASNHANIVKLYEVCQF 97
            ||:   .:|..|.....||:.: :...|:     |...:|...:|:.:   .|.:|.::  |..|
pombe    20 GTI---SEVFVGERKNSKKLYV-IKVQGLVFKRPPHDAMRGKLILESI---GHPHIERI--VDSF 75

  Fly    98 LERD-GQLLILLVFEHVEQDLSDLIDRLPKSGMSPPTIQRLSRELLTGVDFLHSHRIIHRDLKPQ 161
            ::.: |.:.::..|:...  |||::|.:     |..|..::..::.:.:::|..|.|:|||:.|.
pombe    76 IDNEAGSVYLITSFKSFV--LSDVMDEI-----SIDTKCKIVLQISSALEYLEKHGILHRDIHPN 133

  Fly   162 NLLVSS-QGHLKIADFGLA--KTYGSE--MKLTSVVVTLWYRAPEVLL-AQPYNSTVDIWSAACI 220
            |:|:.| .|...::||.:|  |.:..|  .:|...:.|..|||.|.|. ...|...||.|:...:
pombe   134 NILLDSMNGPAYLSDFSIAWSKQHPGEEVQELIPQIGTGHYRAIETLFGCHSYGHEVDRWTFGIL 198

  Fly   221 IFEMFNRRALF-PGTSE--KNQL---DRIFELTGRPTEQQWPQTISVALEHFP-------QRHPK 272
            |.|:|:.:||| .|:||  .::|   ..|.:..|.|....||:     |..||       ..:|.
pombe   199 IAELFSNQALFDDGSSEGWPSELRLTSSIIQTLGTPNPSMWPE-----LSTFPDWNKFIFHEYPP 258

  Fly   273 RP-KDFCPHLCKYADDLLNKMLSYDLHLRPS 302
            :| .:..|.:......:::.:::|.....||
pombe   259 KPWSEILPSVDTSIQYIVSHLVTYSNRASPS 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 73/291 (25%)
csk1NP_593019.1 Protein Kinases, catalytic domain 12..247 CDD:473864 66/247 (27%)

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