DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and Cdk11b

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_665709.2 Gene:Cdk11b / 252879 RGDID:628604 Length:784 Species:Rattus norvegicus


Alignment Length:301 Identity:126/301 - (41%)
Similarity:182/301 - (60%) Gaps:19/301 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YQELNIIGEGAYGTVYRARDVITGNIVALKKVRISLNENGVPMSTLREI-SLLKQLNASNHANIV 89
            :|.||.|.||.||.||||:|..|..|||||::::...:.|.|:::|||| ::||    :.|.|||
  Rat   427 FQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILK----AQHPNIV 487

  Fly    90 KLYEVCQFLERDGQLLILLVFEHVEQDLSDLIDRLPKSGMSPPTIQRLSRELLTGVDFLHSHRII 154
            .:.|:......|   .|.:|..:||.||..|::.: |....|..::.|..:||:||..||.:.|:
  Rat   488 TVREIVVGSNMD---KIYIVMNYVEHDLKSLMETM-KQPFLPGEVKTLMIQLLSGVKHLHDNWIL 548

  Fly   155 HRDLKPQNLLVSSQGHLKIADFGLAKTYGSEMK-LTSVVVTLWYRAPEVLL-AQPYNSTVDIWSA 217
            |||||..|||:|..|.||:.|||||:.|||.:| .|.|||||||||||:|| |:.|::.||:||.
  Rat   549 HRDLKTSNLLLSHAGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSV 613

  Fly   218 ACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQW------PQTISVALEHFPQRHPKRPKD 276
            .||..|:..::.||||.||.:|::::|:..|.|:|:.|      |....:....:|..:.:  |.
  Rat   614 GCIFGELLTQKPLFPGKSEIDQINKVFKDLGTPSEKIWPGYNDLPAVKKMTFSEYPYNNLR--KR 676

  Fly   277 FCPHLCKYADDLLNKMLSYDLHLRPSALACLEHDYFQQEPL 317
            |...|.....||:||.|:|....|.||...|:|:||::.||
  Rat   677 FGALLSDQGFDLMNKFLTYFPGRRVSAEDGLKHEYFRETPL 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 122/294 (41%)
Cdk11bNP_665709.2 STKc_CDC2L1 421..712 CDD:173741 122/294 (41%)

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