DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk4 and CDK20

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:XP_047279074.1 Gene:CDK20 / 23552 HGNCID:21420 Length:364 Species:Homo sapiens


Alignment Length:316 Identity:116/316 - (36%)
Similarity:170/316 - (53%) Gaps:32/316 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YQELNIIGEGAYGTVYRARDV-------------ITGNIVALKKVRISLNENGVPMSTLREISLL 77
            |..|..|||||:|.|::|:.|             .||.|||||||.:...|:|.|...||||..|
Human     4 YCILGRIGEGAHGIVFKAKHVEPRVGWQCLPSILQTGEIVALKKVALRRLEDGFPNQALREIKAL 68

  Fly    78 KQLNASNHANIVKLYEVCQFLERDGQLLILLVFEHVEQDLSDLIDRLPKSGMSPPTIQRLSRELL 142
            :::..:.:  :|:|..|  |....|   .:|.||.:..||:::: |..:..::...::...:.||
Human    69 QEMEDNQY--VVQLKAV--FPHGGG---FVLAFEFMLSDLAEVV-RHAQRPLAQAQVKSYLQMLL 125

  Fly   143 TGVDFLHSHRIIHRDLKPQNLLVSSQGHLKIADFGLAKTY---GSEM----KLTSVVVTLWYRAP 200
            .||.|.|::.|:||||||.|||:|:.|.|||||||||:.:   ||.:    ..||.:...|||||
Human   126 KGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVATSPLPRRWYRAP 190

  Fly   201 EVLL-AQPYNSTVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVALE 264
            |:|. |:.|:..||:||..||:.|:.|...||||.::..||..:..:.|.|..|.||:...:...
Human   191 ELLYGARQYDQGVDLWSVGCIMGELLNGSPLFPGKNDIEQLCYVLRILGTPNPQVWPELTELPDY 255

  Fly   265 H---FPQRHPKRPKDFCPHLCKYADDLLNKMLSYDLHLRPSALACLEHDYFQQEPL 317
            :   |.::.|...::..|.:...|.|||.:.|.|..|.|.:|...|.|.||...||
Human   256 NKISFKEQVPMPLEEVLPDVSPQALDLLGQFLLYPPHQRIAASKALLHQYFFTAPL 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 112/309 (36%)
CDK20XP_047279074.1 STKc_CCRK 3..307 CDD:270826 113/310 (36%)

Return to query results.
Submit another query.