DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and cdk-11.2

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_509746.2 Gene:cdk-11.2 / 181247 WormBaseID:WBGene00013917 Length:668 Species:Caenorhabditis elegans


Alignment Length:307 Identity:120/307 - (39%)
Similarity:176/307 - (57%) Gaps:22/307 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YQELNIIGEGAYGTVYRARDVITGNIVALKKVRISLNENGVPMSTLREISLLKQLNASNHANIVK 90
            |..||:|.||.||.|:|.::..|..:||||:.::...:.|.|::.||||::|  |.|..|.|||.
 Worm   304 YVILNVIAEGTYGEVFRGKNTRTDEVVALKRFKMEKEKEGFPITALREINML--LKAGAHENIVN 366

  Fly    91 LYEVCQFLERDGQLLILLVFEHVEQDLSDLIDRLPKSGMSPPTIQR--LSRELLTGVDFLHSHRI 153
            :.|:   |....:..:.:..|:||.|:..|||::........|.|:  |..:||:|::.:|...|
 Worm   367 VKEI---LVGSTKTEVYMAMEYVEHDVKSLIDKMRSRNQRFKTGQQKTLMSQLLSGIEHMHKLWI 428

  Fly   154 IHRDLKPQNLLVSSQGHLKIADFGLAKTYG------SEMKLTSVVVTLWYRAPEVLL-AQPYNST 211
            :|||||..|||:|..|.|||||||||:.||      ..||||.:|||||||:||:|| .:.|::.
 Worm   429 LHRDLKTSNLLISHSGILKIADFGLAREYGEARDIEKRMKLTPIVVTLWYRSPELLLEPKTYSTP 493

  Fly   212 VDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVALEHFPQRHPKRPKD 276
            ||:||..||:.|....:.:|.|.||.||:.:||::.|.||||.||....:.:.:..:..|.:|..
 Worm   494 VDMWSIGCIMAEFIMMKPMFQGDSEPNQVHQIFQMMGTPTEQIWPDIKELKVWNMVEFPPVKPGQ 558

  Fly   277 FCPHLCK-------YADDLLNKMLSYDLHLRPSALACLEHDYFQQEP 316
            . ..:.|       ...||||.||..:...|.:|...|:||:|.:.|
 Worm   559 L-RRIFKGEKLVNETGFDLLNGMLCLNPANRLTASEALQHDWFSEHP 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 118/301 (39%)
cdk-11.2NP_509746.2 Protein Kinases, catalytic domain 298..600 CDD:473864 118/301 (39%)

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