DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and cdk-1

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001022747.1 Gene:cdk-1 / 176374 WormBaseID:WBGene00000405 Length:332 Species:Caenorhabditis elegans


Alignment Length:314 Identity:127/314 - (40%)
Similarity:177/314 - (56%) Gaps:34/314 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DGDPF----NYQELNIIGEGAYGTVYRARDVITGNIVALKKVRISLNENGVPMSTLREISLLKQL 80
            :||..    ::.:|..||||.||.||:.::..|..:||:||:|:...:.|||.:.:|||||||:|
 Worm    12 EGDSVYTLNDFTKLEKIGEGTYGVVYKGKNRRTNAMVAMKKIRLESEDEGVPSTAVREISLLKEL 76

  Fly    81 NASNHANIVKLYEVCQFLERDGQLLILLVFEHVEQDLSDLIDRLPKSGMSP-PTIQRLSRELLTG 144
               .|.|:|.|..|.....|     :.|:||.:..||...:|:|.|....| .|::..:.::|..
 Worm    77 ---QHPNVVGLEAVIMQENR-----LFLIFEFLSFDLKRYMDQLGKDEYLPLETLKSYTFQILQA 133

  Fly   145 VDFLHSHRIIHRDLKPQNLLVSSQGHLKIADFGLAKTYGSEMKL-TSVVVTLWYRAPEVLL-AQP 207
            :.|.|..|:||||||||||||.:.|.:|:||||||:..|..::: |..||||||||||:|: ||.
 Worm   134 MCFCHQRRVIHRDLKPQNLLVDNNGAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQR 198

  Fly   208 YNSTVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVALEHFPQRHPK 272
            |:..||:||..||..||..::.||.|.||.::|.|||.:.|.|||.:|....|  |..:....||
 Worm   199 YSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRVLGTPTELEWNGVES--LPDYKATFPK 261

  Fly   273 RPKDFC----------PHLCKYADD----LLNKMLSYDLHLRPSALACLEHDYF 312
            ..::|.          .||   .||    ||..:|.||..||.:|...|.|.||
 Worm   262 WRENFLRDKFYDKKTGKHL---LDDTAFSLLEGLLIYDPSLRLNAKKALVHPYF 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 123/302 (41%)
cdk-1NP_001022747.1 STKc_CDK1_euk 21..312 CDD:270845 123/303 (41%)

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