DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and cdk-2

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001021537.2 Gene:cdk-2 / 171911 WormBaseID:WBGene00019362 Length:338 Species:Caenorhabditis elegans


Alignment Length:297 Identity:115/297 - (38%)
Similarity:168/297 - (56%) Gaps:23/297 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LNIIGEGAYGTVYRARDVITGNIVALKKVRISLNENGVPMSTLREISLLKQLNASNHANIVKLYE 93
            |..||||.||.|::|..|......|||.:|...:|.|:|.:.|||||.:|.|   .|.|||.|::
 Worm    18 LRRIGEGTYGVVFKAIHVRDNVKCALKMIRTDRDEEGIPSTCLREISCIKDL---QHDNIVTLFD 79

  Fly    94 VCQFLERDGQLLILLVFEHVEQDLSDLIDRL-PKSGMSPPT-IQRLSRELLTGVDFLHSHRIIHR 156
            :.....:     :.:|||.:::||.:|::.| |.:.:.||. ::....:||:.:.:.|..||:||
 Worm    80 IIYANSK-----LYMVFEFIDRDLKNLLEMLEPTNSVLPPNYVKSFMWQLLSALSYCHLRRIVHR 139

  Fly   157 DLKPQNLLVSSQGHLKIADFGLAKTYG-SEMKLTSVVVTLWYRAPEVLL-AQPYNSTVDIWSAAC 219
            ||||||:|||..|.:||||||||:.:. .....|..|||||||.||:|| :|.|::::|:||..|
 Worm   140 DLKPQNILVSDSGVIKIADFGLARNFSFPSRNYTHEVVTLWYRPPEILLGSQRYSTSLDMWSLGC 204

  Fly   220 IIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVALEHFPQRHPKRPKDF------- 277
            |..|:.:.:.||||..|.:||.:|||:.|.|..:.||...|  ..|:....|:.|.:.       
 Worm   205 IFSEIASNKPLFPGECEISQLFKIFEIVGTPNIKSWPGVDS--FPHYKAVFPQWPVNLKKLEETS 267

  Fly   278 CPHLCKYADDLLNKMLSYDLHLRPSALACLEHDYFQQ 314
            |  |.....|:|.::|.|....|.:|...|.|.||.|
 Worm   268 C--LTGNGLDVLREILRYPPERRLTAKGALSHRYFLQ 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 112/293 (38%)
cdk-2NP_001021537.2 STKc_CDK_like 15..300 CDD:270823 112/293 (38%)

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