DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and LOC1275940

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:XP_315230.4 Gene:LOC1275940 / 1275940 VectorBaseID:AGAMI1_006438 Length:305 Species:Anopheles gambiae


Alignment Length:303 Identity:102/303 - (33%)
Similarity:160/303 - (52%) Gaps:24/303 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PFNYQELNIIGEGAYGTVYRARDVITGN-IVALKKVRISLNENGVPMSTLREISLLKQLNASNHA 86
            |..||.|..||||.:|.|.:|||:.:.: :||:||:.:......:.::|:|||..|:.....|..
Mosquito     6 PSRYQLLGRIGEGVHGVVVKARDLQSDDKMVAIKKLSLRTKFGVISLNTVREIRALQHCRCDNVL 70

  Fly    87 NIVKLYEVCQFLERDGQLLILLVFEHVEQDL-SDLIDRLPKSGMSPPTIQRLSRELLTGVDFLHS 150
            .::.:|.     :..|   |.||||::...| |.|.|.  ::.:|..|::|.:..||.|:.:||.
Mosquito    71 ELLDMYP-----DLAG---ISLVFEYMPHTLYSKLKDE--ENPLSRATVRRYTGMLLKGLAYLHG 125

  Fly   151 HRIIHRDLKPQNLLVSSQGHLKIADFGLAKTYGSEMKLTS-----VVVTLWYRAPEVLL-AQPYN 209
            .|::|||:||.|||:.....|||||||||:.|....:.:|     .|.|.||||||:|. .|.|.
Mosquito   126 LRLMHRDIKPANLLIDRHDVLKIADFGLARIYTEPQQQSSKVYSPQVATRWYRAPEILWGCQRYG 190

  Fly   210 STVDIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVA---LEHFPQRHP 271
            .::|:|::..:..||.....||.|.::..||..:....|.|.::.||:..|:.   ...||....
Mosquito   191 PSIDLWASGAVCAEMLRGVPLFAGATDIEQLALVVRTLGTPNQKDWPEVRSLPDYNKIRFPNSRG 255

  Fly   272 KRPKDFCPHLCKYADD--LLNKMLSYDLHLRPSALACLEHDYF 312
            :|.:|..|. |...|:  |::.::.|:...|.:|...|.|.||
Mosquito   256 ERWEDIFPS-CTTRDEISLVDGLVRYNPAKRLTAEEALLHPYF 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 99/298 (33%)
LOC1275940XP_315230.4 None

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