DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk4 and cilk1

DIOPT Version :10

Sequence 1:NP_477196.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:XP_002934912.3 Gene:cilk1 / 100498050 XenbaseID:XB-GENE-985841 Length:623 Species:Xenopus tropicalis


Alignment Length:299 Identity:112/299 - (37%)
Similarity:167/299 - (55%) Gaps:28/299 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YQELNIIGEGAYGTVYRARDVITGNIVALKKVR---ISLNENGVPMSTLREISLLKQLNASNHAN 87
            |..:..:|:|.||:|...|.|.:|.:||:||::   .|.:|    ...|||:..||:|   ||||
 Frog     4 YTTVKQLGDGTYGSVILGRSVESGELVAIKKMKRKFYSWDE----CMNLREVKSLKKL---NHAN 61

  Fly    88 IVKLYEVCQFLERDGQLLILLVFEHVEQDLSDLI-DR---LPKSGMSPPTIQRLSRELLTGVDFL 148
            ::||.||   :..:.||  ..|||:::::|..|: ||   .|:|     .|:.:..::|.|:.::
 Frog    62 VIKLKEV---IRENNQL--YFVFEYMKENLYQLMKDRNKLFPES-----IIRNIMYQILQGLAYI 116

  Fly   149 HSHRIIHRDLKPQNLLVSSQGHLKIADFGLAKTYGSEMKLTSVVVTLWYRAPEVLL-AQPYNSTV 212
            |.:...||||||:|||......:||||||||:...|....|..|.|.||||||||| |..|||.:
 Frog   117 HKYGFFHRDLKPENLLCMGPELVKIADFGLARETRSRPPYTDYVSTRWYRAPEVLLRATNYNSPI 181

  Fly   213 DIWSAACIIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVA-LEHFPQRH--PKRP 274
            |||:..||:.|::..|.||||:||.:.:.:|.::.|.|.:..|.:...:| ..:|...|  |...
 Frog   182 DIWAVGCIMAEIYTLRPLFPGSSEVDTIFKICQVLGTPKKNDWFEGFQLASAMNFRWAHCVPSNL 246

  Fly   275 KDFCPHLCKYADDLLNKMLSYDLHLRPSALACLEHDYFQ 313
            |...|:.|.....::..||.:|...||:|...|.:.|||
 Frog   247 KTLIPNACADGIQVMRDMLQWDPKKRPTASQALRYSYFQ 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_477196.1 STKc_CDK4_6_like 26..312 CDD:270831 109/296 (37%)
cilk1XP_002934912.3 STKc_MAK_like 4..284 CDD:270824 109/296 (37%)

Return to query results.
Submit another query.