DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk4 and cdk6

DIOPT Version :9

Sequence 1:NP_001286493.1 Gene:Cdk4 / 36854 FlyBaseID:FBgn0016131 Length:317 Species:Drosophila melanogaster
Sequence 2:XP_002934637.2 Gene:cdk6 / 100489734 XenbaseID:XB-GENE-985427 Length:333 Species:Xenopus tropicalis


Alignment Length:288 Identity:137/288 - (47%)
Similarity:195/288 - (67%) Gaps:1/288 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YQELNIIGEGAYGTVYRARDVIT-GNIVALKKVRISLNENGVPMSTLREISLLKQLNASNHANIV 89
            |:.:..|||||||.|::|||:.. |..||||:||:...|.|:|:||:||:::|:.|....|.|:|
 Frog    15 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 79

  Fly    90 KLYEVCQFLERDGQLLILLVFEHVEQDLSDLIDRLPKSGMSPPTIQRLSRELLTGVDFLHSHRII 154
            :|::||.....|.:..:.||||||:|||:..:|::|..|:....|:.:..:||.|:|||||||::
 Frog    80 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPDPGVPSEIIKDMMLQLLRGLDFLHSHRVV 144

  Fly   155 HRDLKPQNLLVSSQGHLKIADFGLAKTYGSEMKLTSVVVTLWYRAPEVLLAQPYNSTVDIWSAAC 219
            ||||||||:||:|.|.:|:||||||:.|..:|.|||||||||||||||||...|.:.||:||..|
 Frog   145 HRDLKPQNILVTSNGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGC 209

  Fly   220 IIFEMFNRRALFPGTSEKNQLDRIFELTGRPTEQQWPQTISVALEHFPQRHPKRPKDFCPHLCKY 284
            |..|||.|:.||.|.|:.:||.:||::.|.|.|::||..::|....|..|.|:..::..|.:.:.
 Frog   210 IFAEMFRRKPLFRGNSDVDQLGKIFDVIGLPEEEEWPHDVAVPRNAFHFRQPQPIENVVPGIDEQ 274

  Fly   285 ADDLLNKMLSYDLHLRPSALACLEHDYF 312
            ..|||.|.|::....|.||.:.|.|.||
 Frog   275 GKDLLIKCLTFSPANRISAYSALSHPYF 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk4NP_001286493.1 STKc_CDK4_6_like 26..312 CDD:270831 135/286 (47%)
S_TKc 26..312 CDD:214567 135/286 (47%)
cdk6XP_002934637.2 STKc_CDK6 13..302 CDD:270846 135/286 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 282 1.000 Domainoid score I1636
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H963
Inparanoid 1 1.050 282 1.000 Inparanoid score I2818
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D419040at33208
OrthoFinder 1 1.000 - - FOG0004605
OrthoInspector 1 1.000 - - oto104089
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2222
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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