DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4927 and TMPRSS2

DIOPT Version :9

Sequence 1:NP_001033953.1 Gene:CG4927 / 36852 FlyBaseID:FBgn0034139 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001128571.1 Gene:TMPRSS2 / 7113 HGNCID:11876 Length:529 Species:Homo sapiens


Alignment Length:257 Identity:78/257 - (30%)
Similarity:123/257 - (47%) Gaps:34/257 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 IVGGAKAAGREFPFMALLGQRGKNSSQIDWDCGAIIIHPKFVLTAAHCLETSETKEQRLDPNYDG 169
            ||||..|....:|:...|..:..:.      ||..||.|::::|||||:      |:.|:..:..
Human   293 IVGGESALPGAWPWQVSLHVQNVHV------CGGSIITPEWIVTAAHCV------EKPLNNPWHW 345

  Fly   170 PKY--VVRLGELDYNSTTDDAQPQDFRVLNYVVHPAYGEDDDTGSRKNDIAVVELEMEATFSEYV 232
            ..:  ::|...:.|.:        .::|...:.||.|    |:.::.||||:::|:...||::.|
Human   346 TAFAGILRQSFMFYGA--------GYQVEKVISHPNY----DSKTKNNDIALMKLQKPLTFNDLV 398

  Fly   233 APACLPLDG---GNEQLQVAAAGWGATSESGHASSHLLKVSLDRYDVAECSQRLEH-KIDVRTQL 293
            .|.|||..|   ..||| ...:|||||.|.|..|..|....:...:...|:.|..: .:.....:
Human   399 KPVCLPNPGMMLQPEQL-CWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMI 462

  Fly   294 CAGSRSTSADTCYGDSGGPVFVQHPIYSCLKQVIGITSYGLVCGVQGLPSVYTKVHLYTDWI 355
            |||....:.|:|.||||||:....   :.:..:||.||:|..|.....|.||..|.::||||
Human   463 CAGFLQGNVDSCQGDSGGPLVTSK---NNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWI 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4927NP_001033953.1 Tryp_SPc 105..358 CDD:238113 78/257 (30%)
Tryp_SPc 105..355 CDD:214473 76/255 (30%)
TMPRSS2NP_001128571.1 DUF3824 <44..91 CDD:289625
LDLa 150..185 CDD:238060
SRCR_2 190..283 CDD:292133
Tryp_SPc 292..521 CDD:214473 76/255 (30%)
Tryp_SPc 293..524 CDD:238113 78/257 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.