DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4945 and AT1G04210

DIOPT Version :9

Sequence 1:NP_788382.1 Gene:CG4945 / 36850 FlyBaseID:FBgn0034137 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_171917.1 Gene:AT1G04210 / 839441 AraportID:AT1G04210 Length:1112 Species:Arabidopsis thaliana


Alignment Length:311 Identity:73/311 - (23%)
Similarity:117/311 - (37%) Gaps:86/311 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LVEHRGSQTEMVLKAVPKPYVTLR------DFYREFHYGL-----HLGVHRH--IVTTYDVAFET 93
            |:..:...||.|:|     ..||.      |..|.|.|..     .||..:|  ||..|  ..|.
plant   797 LIRCKLGSTEAVVK-----MRTLEVSGASLDDIRTFEYTCLGEVRILGALKHDCIVELY--GHEI 854

  Fly    94 AGFYVFTQ--------------EYAPLGDLTSNV---TDSGVGEV---YSKRVAKQLASAIDYMH 138
            :..::.::              |:...|.|..::   :::|...|   .:..:|:.::.|:..:|
plant   855 SSKWITSENGNEHRVLQSSILMEHIKGGSLKGHIEKLSEAGKHHVPMDLALSIARDISGALMELH 919

  Fly   139 SKDIVHRDIKLDNVLIYRSDFQR--------IKLCDFGESFPTGSTVE----------------R 179
            ||||:|||||.:||||   |...        :|||||..:.|..|.:.                .
plant   920 SKDIIHRDIKSENVLI---DLDNQSANGEPIVKLCDFDRAVPLRSHLHGCCIAHVGIPPPNICVG 981

  Fly   180 RNEWLPYSPPEVLEIKPEGSYKADPSHDVWQFGIVIFVCLTGCLPWQKAASDDPRYVRYLAWQGG 244
            ...|:   .|||.....|.::.. ...|:|.||.:||..||    .|....|......:.:.|.|
plant   982 TPRWM---SPEVFRAMHEQNFYG-LEVDIWSFGCLIFELLT----LQNPYFDLSELQIHESLQNG 1038

  Fly   245 LMMMPLRRTPRLFK----LLTSNAQRMFKRFFARISNRPKSLADVTKFLDD 291
                   :.|:|.|    |::...:.......:.:.:..:|..|..:||.|
plant  1039 -------KRPKLPKKLETLISETEEEESTNKLSEVFDLTESDLDTMRFLID 1082

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4945NP_788382.1 SPS1 25..358 CDD:223589 73/311 (23%)
STKc_SBK1 32..293 CDD:270889 73/311 (23%)
AT1G04210NP_171917.1 LRR <25..326 CDD:227223
leucine-rich repeat 58..80 CDD:275380
leucine-rich repeat 81..103 CDD:275380
leucine-rich repeat 128..154 CDD:275380
leucine-rich repeat 155..177 CDD:275380
leucine-rich repeat 178..200 CDD:275380
leucine-rich repeat 201..223 CDD:275380
leucine-rich repeat 224..247 CDD:275380
EDR1 503..740 CDD:373038
S_TKc 820..1104 CDD:214567 66/283 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24359
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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