DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4945 and mark2b

DIOPT Version :9

Sequence 1:NP_788382.1 Gene:CG4945 / 36850 FlyBaseID:FBgn0034137 Length:577 Species:Drosophila melanogaster
Sequence 2:XP_009301419.1 Gene:mark2b / 100005996 ZFINID:ZDB-GENE-080215-4 Length:790 Species:Danio rerio


Alignment Length:611 Identity:140/611 - (22%)
Similarity:247/611 - (40%) Gaps:161/611 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EKIQLVDEFDIIQIVGEGWFGKILLVEHRGSQTEMVLKAVPKPYV---TLRDFYREFHYGLHLGV 79
            |:...:..:.:::.:|:|.|.|:.|..|..:..|:.:|.:.|..:   :|:..:||... :.|..
Zfish    41 EEYPHIGNYRLLKTIGKGNFAKVKLARHVLTSKEVAVKIIDKTQLNSSSLQKVFREVRI-MKLLN 104

  Fly    80 HRHIVTTYDVAFETAGFYVFTQEYAPLGDLTSNVTDSG-VGEVYSKRVAKQLASAIDYMHSKDIV 143
            |.:||..::| .||........|||..|::...:...| :.|..::...:|:.||:.|.|.|.||
Zfish   105 HPNIVKLFEV-IETDKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIV 168

  Fly   144 HRDIKLDNVLIYRSDFQRIKLCDFGES--FPTGSTVERRNEWLPYSPPEVLEIKPEGSYKAD-PS 205
            |||:|.:|:|:...  ..||:.|||.|  |..|:.::......||:.||:.:.|     |.| |.
Zfish   169 HRDLKAENLLLDAD--MNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGK-----KYDGPE 226

  Fly   206 HDVWQFGIVIFVCLTGCLPWQKAASDDPRYVRYLAWQGGLMMMPLRRTPRLFKLLTSNAQRMFKR 270
            .|||..|::::..::|.||:      |.:.::.|..:      .||...|:...::::.:.:.|:
Zfish   227 VDVWSLGVILYTLVSGSLPF------DGQNLKELRER------VLRGKYRIPFYMSTDCENLLKK 279

  Fly   271 FFARISNRPKSLADVTKFLDDRWLAKTAQKEMAEYETDELCPSMYSFHSSPDEKNKLLYTLADCG 335
            |.  |.|..|..:...:.:.|||:       ...||.|:|.|.:   ...||.|:.   ...|..
Zfish   280 FL--ILNPTKRGSLEQQIMKDRWM-------NVGYEDDDLKPYI---EPQPDYKDP---RRTDIM 329

  Fly   336 IETNVDRQQKKNRIKDWIESSIITEEDEE----------ENEETNSASPSSSVSREPLPG-HISS 389
            ::....:::        ||.|::.::..|          .|.|.:.....|..||   || .:::
Zfish   330 LQMGFSQEE--------IEDSLVKQKYNEVMATYLLLDYRNSELDEGVNLSLKSR---PGSDLTN 383

  Fly   390 LRKPTSPAESAKEINSTLKDA----TQKHFDPR-TGALQQGPSEMGQ--------------VAMA 435
            ...|:.|.:..:.::||.|.|    .|..:..| .|..:.|..:.|:              ::..
Zfish   384 SNAPSPPHKVQRSVSSTQKPARRSTDQGSYSKRPQGENKHGVEDSGRKGSSSSTKVPPSPVISSE 448

  Fly   436 YSKSASPASN--YST--------------TASTLNNADSLMTLGSRQDLLASNLTMYTSMETELN 484
            ..||::|::|  .||              |....|..|||.|.|||..                 
Zfish   449 RKKSSTPSTNSILSTGTSRSRNSPISERATLGVQNGKDSLSTPGSRAS----------------- 496

  Fly   485 RLGEADPRLNQRTQSNNPLLTTFDVNTNPAAKNSIGVGTRGSSRSILKSSIATAAYPALGAFNHG 549
                        |.|..|:|::                :..|||:....|::|:|:|        
Zfish   497 ------------TASAGPVLSS----------------SSSSSRTRHHKSLSTSAHP-------- 525

  Fly   550 QSHSLQQLNQHL-----QTSTGLTPS 570
               |...|:.|.     |.:.|.:||
Zfish   526 ---SPADLHSHRPSDPPQRAPGASPS 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4945NP_788382.1 SPS1 25..358 CDD:223589 87/339 (26%)
STKc_SBK1 32..293 CDD:270889 73/267 (27%)
mark2bXP_009301419.1 STKc_MARK 48..301 CDD:270974 74/275 (27%)
S_TKc 49..301 CDD:214567 74/274 (27%)
UBA_MARK2 319..360 CDD:270589 7/51 (14%)
AMPKA_C_like 691..789 CDD:302605
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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