DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and Slc6a21

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_006541333.1 Gene:Slc6a21 / 76713 MGIID:1923963 Length:749 Species:Mus musculus


Alignment Length:662 Identity:172/662 - (25%)
Similarity:275/662 - (41%) Gaps:150/662 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELALGQHNRKGAIT 97
            |.:.:|.::.|::.|.:.|||||||::||||:||:.|.|:|::.||||.|||:.:||..|...|.
Mouse    54 KTENILILVAFSIGLGSTWRFPYLCHQNGGGSFLLMYFILLLLLGIPLMYMEMVIGQWLRMDNIQ 118

  Fly    98 CWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTSCNNIWNTPNCRPFES 162
            .|..|||...|:||:.:|....|..|.:.:::|||.:...||...|||.:|              
Mouse   119 AWKYLVPWLSGVGYSNILACVLVVLYNSALVSWSLFYLGQSFDYPLPWQNC-------------- 169

  Fly   163 QNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVGHVEGFQSAASEYFNRYILELNRS- 226
                  |::.|.|  ...|| :.|::|.:                      :||..:.| |..| 
Mouse   170 ------PLVENLS--MVAGN-TCLWSEPH----------------------QYFWYHTL-LQASN 202

  Fly   227 ---EGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAVLLILLIRGLTLPG 288
               |||.   .:..::.|||...::..|.::...|..|..::.|:.||...:||...||.|.|.|
Mouse   203 QMEEGIE---VLVLNVTLCLFATWIFLYVTMVTRIKISVLMMIFSILFSNVLLLCFFIRTLFLNG 264

  Fly   289 SFLGIQYYL-TPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVYKDALLTSFIN 352
            |.....:.| |...|.:...:.|..|...|.:|||.|.|.::.:::|.....|..|.|...:.:|
Mouse   265 SVRASLWRLVTIELSILSSLDAWRQAGGHVLYSLGLGMGTIITFSTYQPRGENYIKWASFVAMVN 329

  Fly   353 SATSFIAGFVIFSVLGYMAHTLGVR---------------------------------IEDVA-- 382
            .|||.::.||||.|:|:...|.|..                                 :|.:|  
Mouse   330 LATSLLSSFVIFLVMGFWTTTSGTMCIKRSVSNLINLIANGVLPKAAWPPGDIIHKPPLEYLAWI 394

  Fly   383 ---------------------------TEGPGLVFVVYPAAIATMPASTFWALIFFMMLLTLGLD 420
                                       .|||||.:|.:..||:..|.|:|||:||||.|..:||.
Mouse   395 NQLPNNLKSQVIHQTLPCSILIQKEKIMEGPGLSYVAFSQAISLFPGSSFWAIIFFMSLAIMGLG 459

  Fly   421 SSFGGSEAIITALSDEFPKIKRNRELFVAGLFSLYFVVGLASCTQGGFYFFHLLDRYAAGYSILV 485
            :.....|.|:..|........::..|....:....|:..|...::.|.|...|.|.......:::
Mouse   460 TMLTLLEGIVLPLQKSISTFAKHPNLVQVLVCLGGFLGSLVFSSRPGSYVVFLFDDLLVPMVLII 524

  Fly   486 AVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVA-PIFLLFITVYGL-IGYEPLTYA 548
            .|..:.::::|:||..||..::...:|......:...|.:|. |..|:.:|:|.| :.|....| 
Mouse   525 IVVIQNLSLAWLYGIKRFRAEVFGQLGSLVWSPFTFLWSYVTLPTLLVLLTIYFLNLYYSGSPY- 588

  Fly   549 DYVYPSWANA-------------LGWCIAGSSVVMIPAVA-------------IFKLLSTPGSLR 587
               |.||.::             |||....|.:.::|.:.             |.:.|..|.|.:
Mouse   589 ---YVSWNDSMSHEVKQPYKKIPLGWVTFLSVLALLPILVYPLQHWWYLDDPNICETLEKPLSSK 650

  Fly   588 QRFTI--LTTPW 597
            :..|:  ..|.|
Mouse   651 KTVTVPNRVTQW 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 171/660 (26%)
Slc6a21XP_006541333.1 SLC5-6-like_sbd 48..622 CDD:382020 164/620 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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