DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and slc6a1l

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_021330952.1 Gene:slc6a1l / 568985 ZFINID:ZDB-GENE-041210-296 Length:578 Species:Danio rerio


Alignment Length:615 Identity:256/615 - (41%)
Similarity:375/615 - (60%) Gaps:67/615 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 DNDNNSISDE--------RETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIML 73
            |.|:|||..|        |.:|.||.|||||.:|:|:.|.|||||||||.||||||||:||...|
Zfish     9 DLDHNSIPVEEKENKIPDRGSWKGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFTTL 73

  Fly    74 VVGGIPLFYMELALGQHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFAS 138
            |..|||||.:|.||||:...|.:..| :|:|:.||:|.|.|:::|:::.||.:||||:|.:.|:|
Zfish    74 VFAGIPLFLLETALGQYTSVGGLGVW-KLIPMMKGVGLAAVVLSFWLNIYYIIIIAWALYYLFSS 137

  Fly   139 FTNSLPWTSCNNIWNTPNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVG 203
            ....|||.:|:|.|||..|                                 :.|.|.|||:   
Zfish   138 LKAELPWQTCDNPWNTDRC---------------------------------FSNYSLLDTT--- 166

  Fly   204 HVEGFQSAASEYFNRYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFT 268
               ...||.:|::.|.:.:|  :.|:.:.|.::|.:...|.:.:::.|||:|||:..:||||:|:
Zfish   167 ---NLSSAVTEFWERNMHQL--TNGLEEPGELRWPLVGTLALSWILVYFSIWKGVEWTGKVVYFS 226

  Fly   269 ALFPYAVLLILLIRGLTLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYAS 333
            |.:||.:|.||..||:||||:..|:.:|:||||:.:.|:|||:|||||:|||.|.|.|.|:|..|
Zfish   227 ATYPYFMLFILFFRGVTLPGAIDGVLFYITPNFNKLLKSEVWLDAATQIFFSYGLGLGSLIALGS 291

  Fly   334 YNKYHNNVYKDALLTSFINSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEGPGLVFVVYPAAIA 398
            ||.::||||:|:::...|||.||..||.||||::|:|::.....||::|..||||.|:.||.|:.
Zfish   292 YNSFNNNVYRDSVIVCCINSCTSMFAGIVIFSIVGFMSYITKRPIEELAASGPGLAFLAYPQAVT 356

  Fly   399 TMPASTFWALIFFMMLLTLGLDSSFGGSEAIITALSDEFPKIKRNR-ELFVAGLFSLYFVVGLAS 462
            .:|.|:.||::||.||:.|||||.|...|..||||.||:|.:.|.| ::|:..:..:.|::|.::
Zfish   357 QLPMSSLWAILFFSMLMMLGLDSQFCTVEGFITALMDEYPTVLRKRKKIFILIVCLVSFIIGFSN 421

  Fly   463 CTQGGFYFFHLLDRY-AAGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFV 526
            .||||.|.|.|.|.| |:|..:|..||||.|:::|.||..:|.::|.:|||:.|..:|:.||.:.
Zfish   422 ITQGGLYVFKLFDYYSASGMCLLFLVFFETISIAWFYGAEKFYKNIEEMIGYRPCGFWKQCWIYF 486

  Fly   527 APIFLLFITVYGLIGYEPLTYADYVYPSWANALGWCIAGSSVVMIPAVAIFKLLSTPGSLRQRFT 591
            .|...|.:..:..|...|||...||||:|...:||.::.||:|:||...|:...||.|::|||:.
Zfish   487 TPTICLGVFTFSAIEMTPLTLGKYVYPAWGQGVGWLMSLSSMVLIPGYIIYMFFSTKGNIRQRWH 551

  Fly   592 ILTTPWRDQQSMAMVLNGVTTEVTVVRLTD 621
            .:|.|               ||:|...:.|
Zfish   552 KMTKP---------------TELTTSDVND 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 245/571 (43%)
slc6a1lXP_021330952.1 SLC5-6-like_sbd 15..558 CDD:320982 248/599 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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