DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and si:ch211-225b11.1

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001103931.1 Gene:si:ch211-225b11.1 / 561694 ZFINID:ZDB-GENE-060531-39 Length:609 Species:Danio rerio


Alignment Length:587 Identity:245/587 - (41%)
Similarity:365/587 - (62%) Gaps:48/587 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SDERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELALG 88
            ::.||||..:::|:|:.||:||.|.||||||||||::||||||:||.|||.:.||||.:||..:|
Zfish    51 AEPRETWGRRLEFVLATIGYAVGLGNVWRFPYLCYRSGGGAFLIPYMIMLFLCGIPLLFMEFTVG 115

  Fly    89 QHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTSCNNIWN 153
            |:.|.|.:....::.|||||:|.|.|:|::.:..||||::.|:|.:...||:.||||.||||.||
Zfish   116 QYTRLGPVHALAQICPLFKGVGLATVVISYVLCTYYNVLMTWALYYLLHSFSPSLPWQSCNNTWN 180

  Fly   154 T-PNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVGHVEGFQSAASEYFN 217
            | .||                                        .|...|:....|||:.::|:
Zfish   181 TVANC----------------------------------------STGFPGNATHLQSASQQFFD 205

  Fly   218 RYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAVLLILLIR 282
            ..:||:  :.||...|.::|::...|::.:.|.||.::||:.::||||:|||.|||.:|..||:.
Zfish   206 HKVLEM--TSGIERAGGVRWELFGLLVLAWGIVYFCIFKGVKSTGKVVYFTATFPYFILFALLVN 268

  Fly   283 GLTLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVYKDALL 347
            .:.|||:..||.::|.||:|.:.:.:|||:||.|:|.|:|..||.:::.||||||:||:.:|..:
Zfish   269 NVQLPGAKNGILFFLMPNWSKLLEVQVWVNAAAQIFNSIGISFGSMISMASYNKYNNNILRDTFI 333

  Fly   348 TSFINSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEGPGLVFVVYPAAIATMPASTFWALIFFM 412
            .|..|||||.:|||||||.:|||||...:.::|:||:||||||||||...:|||.|..||.:||:
Zfish   334 VSLANSATSIVAGFVIFSAIGYMAHIHNLPVDDIATDGPGLVFVVYPEVFSTMPVSQLWAPLFFI 398

  Fly   413 MLLTLGLDSSFGGSEAIITALSDEFP----KIKRNRELFVAGLFSLYFVVGLASCTQGGFYFFHL 473
            |||.|||||.|...|..:|.:.|.|.    |:.:.:||.|..:.|..|::|:...|:||.|.|.|
Zfish   399 MLLCLGLDSQFAMVEVAVTFIMDGFGRKALKVFKRKELIVLAVCSFGFLLGIPHITRGGIYVFQL 463

  Fly   474 LDRYAAGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVAPIFLLFITVYG 538
            :|.|.|..|::...|||.:||:.|:|..|.|..:.:|:|..|..::::||::::|:.:|.|.:..
Zfish   464 MDHYTAVVSLMFLAFFEVLAVTLIFGVKRLSVMVENMLGKKPNLFFRICWQYLSPMLVLGILISS 528

  Fly   539 LIGYEPLTYA-DYVYPSWANALGWCIAGSSVVMIPAVAIFKLLSTPGSLRQRFTILTTPWRDQQS 602
            ::.|.|..|. .|.||.||..|||.|:..|::.||..|:.:|.:|.|||.||.....||..|.:|
Zfish   529 IVQYTPARYGKSYTYPLWAELLGWFISLVSIIWIPLGALHELWTTEGSLLQRLKKSITPTVDLES 593

  Fly   603 MA 604
            ::
Zfish   594 VS 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 242/575 (42%)
si:ch211-225b11.1NP_001103931.1 SLC5-6-like_sbd 54..587 CDD:294310 241/574 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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