DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and Slc6a12

DIOPT Version :10

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_059031.1 Gene:Slc6a12 / 50676 RGDID:620255 Length:628 Species:Rattus norvegicus


Alignment Length:583 Identity:261/583 - (44%)
Similarity:368/583 - (63%) Gaps:41/583 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DNNSISDERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYM 83
            |.:.:.| |..|:.|::|:|||.|..:.|.|||||||||||||||||.:||.|.....|||:|::
  Rat    43 DKDQVKD-RGQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFSCGIPVFFL 106

  Fly    84 ELALGQHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTSC 148
            |:||||::.:|::|.|.::.||.:|||.|.|:|..|::.||.:|:||:|.:.|:|||..||||:|
  Rat   107 EVALGQYSSQGSVTAWRKICPLLQGIGMASVVIESYLNIYYIIILAWALFYLFSSFTWELPWTTC 171

  Fly   149 NNIWNTPNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVGHVEGFQSAAS 213
            .|.|||.:|..|.           |||                      .|.|..:.|.|.|...
  Rat   172 TNSWNTEHCVDFL-----------NYS----------------------STRAASYSENFTSPVM 203

  Fly   214 EYFNRYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAVLLI 278
            |::.|.:|.:  :.||||||:::|::|||||:.::||||.:|||:.::||||:|||.|||.:|:|
  Rat   204 EFWERRVLGI--TSGIHDLGSLRWELALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLII 266

  Fly   279 LLIRGLTLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVYK 343
            |||||:||||::.||.:||.|:...:...:||:||.||:|||.....|.|.|..||||||||.|:
  Rat   267 LLIRGVTLPGAYQGIVFYLKPDLLRLKDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYR 331

  Fly   344 DALLTSFINSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEGPGLVFVVYPAAIATMPASTFWAL 408
            |::...|:||||||:||||:||:||:||...||.|.:||..||||.|:.:|.|:..||.|..|:.
  Rat   332 DSIALCFLNSATSFVAGFVVFSILGFMAQEQGVPISEVAESGPGLAFIAFPKAVTMMPLSQLWSC 396

  Fly   409 IFFMMLLTLGLDSSFGGSEAIITALSDEFPKIKR---NRELFVAGLFSLYFVVGLASCTQGGFYF 470
            :||:|||.|||||.|...|.::||..|.||:..|   .|||.:..:..:.:::||...|:||.|.
  Rat   397 LFFLMLLFLGLDSQFVCMECLVTASMDMFPQQLRKRGRRELLILAVAIVCYLMGLLLVTEGGMYI 461

  Fly   471 FHLLDRYA-AGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVAPIFLLFI 534
            |.|.|.|| :|..:|....||.|.:.|:||.:||.:::.||||:.|....::.|.|:.|...|..
  Rat   462 FQLFDYYASSGICLLFLSLFEVICIGWVYGADRFYDNVEDMIGYRPWPLVKISWLFLTPGLCLAT 526

  Fly   535 TVYGLIGYEPLTYAD-YVYPSWANALGWCIAGSSVVMIPAVAIFKLLSTPGSLRQRFTILTTP 596
            ..:.|..|.||.|.: |:||||..::||.:|.||:..:|...|..||.|.||.::|...|.||
  Rat   527 FFFSLSKYTPLKYNNVYIYPSWGYSIGWLLAFSSMACVPLFIIITLLKTQGSFKKRLQRLITP 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 259/575 (45%)
Slc6a12NP_059031.1 SLC5-6-like_sbd 49..589 CDD:444915 258/575 (45%)

Return to query results.
Submit another query.