DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and Gat

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster


Alignment Length:600 Identity:271/600 - (45%)
Similarity:391/600 - (65%) Gaps:30/600 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GHIS--KSKTPTPHDNDNN----SISD--ERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNG 61
            ||.:  :|.:||..|..|.    .|..  :|.:||.|:||:|||:|.|:.|.|||||||||||||
  Fly    28 GHTTSLQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNG 92

  Fly    62 GGAFLVPYGIMLVVGGIPLFYMELALGQHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNV 126
            ||||::||.|.|.:.|||:|:|||||||....|.:..: ::.|:|||||||..:::.:::.||.|
  Fly    93 GGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVF-KIAPIFKGIGYAAAVMSCWMNVYYIV 156

  Fly   127 IIAWSLRFFFASFTNSLPWTSCNNIWNTPNC-RPFESQNASRVPVIGNYSDLYAMGNQSLLYNET 190
            |:||::.:||.|....:||.:|||.|||.|| ..:|.:|.       :..|....|....:.:.:
  Fly   157 ILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNL-------HCWDKIINGTTQKVCSVS 214

  Fly   191 YMNGSSLDTSAVGHVEGFQSAASEYFNRYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLW 255
            .:|.:||:.:         ....|::.|..|::  |.||.::|.|:|::|..||:|:::|||.:|
  Fly   215 ALNITSLELT---------DPVKEFWERRALQI--SHGIEEIGNIRWELAGTLLLVWILCYFCIW 268

  Fly   256 KGISTSGKVVWFTALFPYAVLLILLIRGLTLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFS 320
            ||:..:||||:|||||||.:|.|||:||:||||:..||::|:.||||.:..:|||:||.||:|||
  Fly   269 KGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFS 333

  Fly   321 LGPGFGVLLAYASYNKYHNNVYKDALLTSFINSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEG 385
            .|.|.|.|:|..||||:.||||||||:...:||:||..||||||||:|:|||.....:.|||..|
  Fly   334 YGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMAHEQQRPVADVAASG 398

  Fly   386 PGLVFVVYPAAIATMPASTFWALIFFMMLLTLGLDSSFGGSEAIITALSDEFPKIKRNR-ELFVA 449
            |||.|:|||:|:..:|.|..|:.:||.|||.:||||.|...|..|||:.||:|::.|.| |:|:|
  Fly   399 PGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIA 463

  Fly   450 GLFSLYFVVGLASCTQGGFYFFHLLDRYA-AGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGF 513
            .:.:|.::|||...||||.|.|.:||.|| :|:.:|..:|||.:::||.||.:||.:.|:||||:
  Fly   464 IVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGY 528

  Fly   514 PPGRYWQVCWRFVAPIFLLFITVYGLIGYEPLTYADYVYPSWANALGWCIAGSSVVMIPAVAIFK 578
            .|..:|:.||....|...|.:..:.::.:.|:.|.||.||.||:|.||..|.||::.||....:.
  Fly   529 YPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDYSYPWWAHAFGWFTALSSMLYIPLYMFWL 593

  Fly   579 LLSTPGSLRQRFTIL 593
            ...|||.|.::...|
  Fly   594 WKRTPGELSEKIRAL 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 262/569 (46%)
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 262/569 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440716
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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