DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and Slc6a6

DIOPT Version :10

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_008761345.1 Gene:Slc6a6 / 29464 RGDID:61912 Length:631 Species:Rattus norvegicus


Alignment Length:620 Identity:276/620 - (44%)
Similarity:378/620 - (60%) Gaps:51/620 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SKSKTP-TPHDNDNNSISDERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGI 71
            |..|:| |..:::.:....:||.||.|:||:|||.|..|.|.||||||||||||||||||:||.|
  Rat    31 SPGKSPGTRPEDEADGKPPQREKWSSKIDFVLSVAGGFVGLGNVWRFPYLCYKNGGGAFLIPYFI 95

  Fly    72 MLVVGGIPLFYMELALGQHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFF 136
            .|...|:|:|::|:.:||:..:|.||||.::.|||.|||||.::|...::.||.||:||:..:.|
  Rat    96 FLFGSGLPVFFLEVIIGQYTSEGGITCWEKICPLFSGIGYASIVIVSLLNVYYIVILAWATYYLF 160

  Fly   137 ASFTNSLPWTSCNNIWNTPNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSA 201
            .||...|||..||:.||||.|.                       ..:|..||::.    :..||
  Rat   161 QSFQKDLPWAHCNHSWNTPQCM-----------------------EDTLRRNESHW----VSLSA 198

  Fly   202 VGHVEGFQSAASEYFNRYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVW 266
            .    .|.|...|::.|.:|.|  |.||...|::|||:|||||:|:|:|:|.:|||:.::||||:
  Rat   199 A----NFTSPVIEFWERNVLSL--SSGIDHPGSLKWDLALCLLLVWLVCFFCIWKGVRSTGKVVY 257

  Fly   267 FTALFPYAVLLILLIRGLTLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAY 331
            |||.||:|:||:||:|||||||:..||::||.||.|.:...:||:||.||:|||.....|.:.:.
  Rat   258 FTATFPFAMLLVLLVRGLTLPGAGEGIKFYLYPNISRLEDPQVWIDAGTQIFFSYAICLGAMTSL 322

  Fly   332 ASYNKYHNNVYKDALLTSFINSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEGPGLVFVVYPAA 396
            .|||||..|.|:|.:|...:||.|||::||.|||:||:||...||.|.|||..||||.|:.||.|
  Rat   323 GSYNKYKYNSYRDCMLLGCLNSGTSFVSGFAIFSILGFMAQEQGVDIADVAESGPGLAFIAYPKA 387

  Fly   397 IATMPASTFWALIFFMMLLTLGLDSSFGGSEAIITALSDEFPKIKR---NRELFVAGLFSLYFVV 458
            :..||..|||:::||:|||.|||||.|...|..||:|.|.:|...|   .||:|:|.:.|:.:::
  Rat   388 VTMMPLPTFWSILFFIMLLLLGLDSQFVEVEGQITSLVDLYPSFLRKGYRREIFIAIVCSISYLL 452

  Fly   459 GLASCTQGGFYFFHLLDRYAA-GYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVC 522
            ||...|:||.|.|.|.|.||| |..:|...|||...::||||.:...:.|.||||:.||.:.:..
  Rat   453 GLTMVTEGGMYVFQLFDYYAASGVCLLWVAFFECFVIAWIYGGDNLYDGIEDMIGYRPGPWMKYS 517

  Fly   523 WRFVAPIFLLFITVYGLIGYEPLTYAD-YVYPSWANALGWCIAGSSVVMIPAVAIFKLLSTPGSL 586
            |..:.|...:...::.|:.|.||||.. |.||.||..|||.:|.||:|.||.|.:..|..|.|.|
  Rat   518 WAVITPALCVGCFIFSLVKYVPLTYNKVYRYPDWAIGLGWGLALSSMVCIPLVIVILLCRTEGPL 582

  Fly   587 RQRFTILTTP-----WRDQQ-------SMAMVLNG 609
            |.|...|.||     |..::       |.|.::||
  Rat   583 RVRIKYLITPREPNRWAVEREGATPFHSRATLMNG 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 267/579 (46%)
Slc6a6XP_008761345.1 SLC5-6-like_sbd 51..592 CDD:444915 265/573 (46%)

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