DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and Slc6a18

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_058859.2 Gene:Slc6a18 / 29323 RGDID:69352 Length:615 Species:Rattus norvegicus


Alignment Length:653 Identity:226/653 - (34%)
Similarity:321/653 - (49%) Gaps:126/653 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ISDERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELAL 87
            |.|||..|..|:.:|||.|||||.|.|:|||||||:.:||||||:||.|.||..||||||:|||:
  Rat    13 IEDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCHTHGGGAFLIPYFIALVFEGIPLFYIELAI 77

  Fly    88 GQHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTSCNNIW 152
            ||..|:|:|..|..:.|...|:|.....::|.|..|||.|:.|.|.||..||.:.|||::|    
  Rat    78 GQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTILLWVLWFFLNSFQHPLPWSTC---- 138

  Fly   153 NTPNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVGHVEGFQSAASEYFN 217
                                                       .||.:..|.|:..||:.:..:.
  Rat   139 -------------------------------------------PLDLNRTGFVQECQSSGTVSYF 160

  Fly   218 RYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAVLLILLIR 282
            .|...||.:..|.:.|.|:|.:.|||:..:...|..:.:||.::|||::|||||||.||.|.|||
  Rat   161 WYRQTLNITSDISNTGTIQWKLFLCLVACWTTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIR 225

  Fly   283 GLTLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVYKDALL 347
            ||||||:..|:.|..|||...:....||:|||||:||||...||..:|:||||:..||..|||:.
  Rat   226 GLTLPGATEGLTYLFTPNMKILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNQPRNNCEKDAVT 290

  Fly   348 TSFINSATSFIAGFVIFSVLG---------------------------------------YMAHT 373
            .:.:||.||..|...|||::|                                       |:..|
  Rat   291 IALVNSMTSLYASITIFSIMGFKASNDYGRCLDRNILSLINEFDFPELSISRDEYPSVLMYLNAT 355

  Fly   374 LGVRIE-------------DVATEGPGLVFVVYPAAIATMPASTFWALIFFMMLLTLGLDSSFGG 425
            ...|:.             |.:..||||.|:|:..|:..||.::.|:::||.||.||||.|.||.
  Rat   356 QPERVARLPLKTCHLEDFLDKSASGPGLAFIVFTEAVLHMPGASVWSVLFFGMLFTLGLSSMFGN 420

  Fly   426 SEAIITALSDE--FPKIKRNRELFVAGLFSLYFVVGLASCTQGGFYFFHLLDRYAAGYSILVAVF 488
            .|.:||.|.|.  .|| ...:|.....:..:.|:..:....|.|.|:..:.|.:||..::::..|
  Rat   421 MEGVITPLFDMGILPK-GVPKETMTGVVCFICFLSAICFTLQSGSYWLEIFDSFAASLNLIIFAF 484

  Fly   489 FEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVAPIFL--LFITVYGLIGYEPLTY---- 547
            .|.:.|..:||..||.:||..|.|..|..||||.||.|:|:.|  :|::...|:.....:|    
  Rat   485 MEVVGVIHVYGIKRFCDDIEWMTGRRPSLYWQVTWRVVSPMLLFGIFLSYIVLLAQSSPSYKAWN 549

  Fly   548 ---------ADYVYPSWANALGWCIAGSSV--VMIPAVAIFKLLSTPGSLRQRF--TILTTPWRD 599
                     .:.:||.|....  |:..|.:  :.:|.:|:.:||.   ..|||:  |.|.:..:.
  Rat   550 PQYEHFPSREEKLYPGWVQVT--CVLLSFLPSLWVPGIALAQLLF---QYRQRWKNTHLESALKP 609

  Fly   600 QQS 602
            |:|
  Rat   610 QES 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 221/642 (34%)
Slc6a18NP_058859.2 SLC6sbd_B0AT3 16..591 CDD:212086 215/624 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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