DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and Slc6a16

DIOPT Version :10

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_038949993.1 Gene:Slc6a16 / 292902 RGDID:1561338 Length:850 Species:Rattus norvegicus


Alignment Length:705 Identity:185/705 - (26%)
Similarity:285/705 - (40%) Gaps:163/705 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ISKSKTPTPHDNDNNSISDERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGI 71
            |..:||    ..:|:::......||.|.:::|:::|:.|..:.:.||.......|..:|.:.|.:
  Rat   216 IELNKT----SKENSNVFPPWLLWSSKAEYILALMGYLVMPSGLLRFVTCWVHKGSWSFFIAYLL 276

  Fly    72 MLVVGGIPLFYMELALGQHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFF 136
            ||...||||.::|:|:||..::.:|..|..|.|.|.|:||::|::....:.|.||..:|.|.:..
  Rat   277 MLFGLGIPLLFLEMAVGQRAQQSSIDLWKTLSPWFGGLGYSMVMVCLITNTYLNVFNSWILFYMS 341

  Fly   137 ASFTNSLPWTSCNNIWNTPNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSA 201
            ..|...:||..|                    |:..|.||......|:..|.             
  Rat   342 HIFHFVVPWDRC--------------------PLQKNSSDFDPECEQATSYT------------- 373

  Fly   202 VGHVEGFQSAASEYFNRYILELNRSEGIHDLGAIKWDMALCLLIVY-LICYFSLWKGISTSGKVV 265
                         || .|...|..|:.|.|.|...:::|:.|.:.: |||.|.: .||.:.|||:
  Rat   374 -------------YF-WYRQTLKASDSIEDGGQPSFNLAMFLFLAWCLICVFMV-NGIKSLGKVL 423

  Fly   266 WFTALFPYAVLLILLIRGLTL-PGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLL 329
            ......||.:::..|:|.|:: .|...|:.|.|....:.|....:|..|..||.|.:|.|||.::
  Rat   424 CVLLQVPYFIIICFLVRTLSMGNGIGYGLNYLLILEVARISDLTMWCQAGIQVLFDIGLGFGPVI 488

  Fly   330 AYASYNKYHNNVYKDALLTSFINSATSFIAGFVIFSVLGYMA-----H-------------TLGV 376
            :.:|:....||..|||.|.......|..|......|:||:.|     |             ..|:
  Rat   489 SLSSHMSDFNNCLKDAFLMGLFKIVTLLITTPFFLSILGFWATITTHHCCKKNTNKLLMLIAQGI 553

  Fly   377 -----------------------------------------------RIEDVATEGPGLVFVVYP 394
                                                           ||||    .|..:|:::.
  Rat   554 LPPEVEPPDLNDDPISIYNSWLNSLPPPLRSAVLSMVPECNIQKQFMRIED----SPRFLFLIFT 614

  Fly   395 AAIATMPASTFWALIFFMMLLTLGLDSSFGGSEAIITALSDEFPKIKRNRELFVAGLFSLYFVVG 459
            ..|:.:|.|.||.::||:.||.|||.::.......|..|.|.||..:|...|...|:....|:.|
  Rat   615 EVISLLPGSAFWTVLFFLALLGLGLCTNLMYMLGNILTLQDTFPFCRRQPRLLTVGVSMTTFLCG 679

  Fly   460 LASCTQGGFYFFHLLDRYAAGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFP--PGRYWQVC 522
            |......|.|:|.||..|.....|:..:..|.:||:|.||..||..|:..::..|  ||..|  .
  Rat   680 LIFIQPSGIYYFSLLSEYWVAVPIITIILCETLAVAWAYGAKRFLADMMALLSRPIFPGCSW--L 742

  Fly   523 WRFVAPI----FLLFITVYGLIGYEPLTYADY----------VYPSWANALGWCIAG-SSVVMIP 572
            ||:|:|:    .||||.:|.:.|  ||.|..:          .:|.|:..|   ||| |:||::|
  Rat   743 WRYVSPVVLLGLLLFICIYLVQG--PLVYMAWDSSTSKEVVRYFPMWSLML---IAGLSAVVLMP 802

  Fly   573 AVAIFKLLSTPGSLRQRFTILTTPWRDQQSMAMVLNGVTTEVTVVRLTDTETAKE 627
            ..|.|......|          .|:|...|..:.|.....      ||..|.:|:
  Rat   803 IPAYFAYCLNLG----------IPFRSAPSCKLPLGSGQL------LTTKEASKD 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 173/653 (26%)
Slc6a16XP_038949993.1 SLC6sbd_NTT5 232..802 CDD:271392 169/628 (27%)

Return to query results.
Submit another query.