DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and Slc6a17

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001280618.1 Gene:Slc6a17 / 229706 MGIID:2442535 Length:727 Species:Mus musculus


Alignment Length:637 Identity:226/637 - (35%)
Similarity:330/637 - (51%) Gaps:127/637 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SDERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELALG 88
            :::|..|:.|:.::|:.|||:|.|.|:|||||||.||||||:||||.::|::.|||||::|||:|
Mouse    57 TEDRPAWNSKLQYILAQIGFSVGLGNIWRFPYLCQKNGGGAYLVPYLVLLIIIGIPLFFLELAVG 121

  Fly    89 QHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTSCNNIWN 153
            |..|:|:|..|..:.|...|||::..::..:|..||||||.||:.:||.||...|||:.|     
Mouse   122 QRIRRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVIIGWSVFYFFKSFQYPLPWSEC----- 181

  Fly   154 TPNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVGHVEGFQSAASEYFNR 218
                           |||.|                        .|.||...|..:|:|:.|| .
Mouse   182 ---------------PVIRN------------------------GTVAVVEPECEKSSATTYF-W 206

  Fly   219 YILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAVLLILLIRG 283
            |...|:.|..|.:.|.:.|.|.||||:.:.|...::.|||.:||||::|::||||.||...|:||
Mouse   207 YREALDISNSISESGGLNWKMTLCLLVAWSIVGMAVVKGIQSSGKVMYFSSLFPYVVLACFLVRG 271

  Fly   284 LTLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVYKDALLT 348
            |.|.|:..||.:..||....:...:||.:|||||||:||.|||.::|::||||..||.:.||.|.
Mouse   272 LLLRGAVDGILHMFTPKLDKMLDPQVWREAATQVFFALGLGFGGVIAFSSYNKQDNNCHFDAALV 336

  Fly   349 SFINSATSFIAGFVIFSVLGYMAHTLGVR--IE-------------------------------- 379
            ||||..||.:|..|:|:|||:.|:.:..:  :|                                
Mouse   337 SFINFFTSVLATLVVFAVLGFKANIMNEKCVVENAEKILGYLNSNVLSRDLIPPHVNFSHLTTKD 401

  Fly   380 ------------------------------DVATEGPGLVFVVYPAAIATMPASTFWALIFFMML 414
                                          |.:.:|.||.|:.:..|:...|||.||:::||:||
Mouse   402 YSEMYSVIMTVKEKQFPALGLDPCLLEDELDKSVQGTGLAFIAFTEAMTHFPASPFWSVMFFLML 466

  Fly   415 LTLGLDSSFGGSEAIITALSDEFPKIKRNRELFVAGLFSLYFVVGLASCTQGGFYFFHLLDRYAA 479
            :.|||.|..|....|.|.:.|.|   |..:|:|..|.....|.|||....:.|.||..:.|.|:|
Mouse   467 INLGLGSMIGTMAGITTPIIDTF---KVPKEMFTVGCCVFAFFVGLLFVQRSGNYFVTMFDDYSA 528

  Fly   480 GYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVAPIFLLFITVYGLI--GY 542
            ...:.|.|..|.|||:|||||.:|.:::.:|:||.|.|::...|:||:|:.:..:|...:|  |.
Mouse   529 TLPLTVIVILENIAVAWIYGTKKFMQELTEMLGFQPYRFYFYMWKFVSPLCMAVLTTASIIQLGV 593

  Fly   543 EPLTYADYV----------YPSWANALGWCIAGSSVVMIPAVAI---FKLLS 581
            .|..|:.::          :|:||.||...:...:.:.||.|.|   |.|||
Mouse   594 SPPGYSAWIKEEAAERYLYFPNWAMALLITLIAVATLPIPVVFILRHFHLLS 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 226/634 (36%)
Slc6a17NP_001280618.1 SLC6sbd_NTT4 60..648 CDD:271403 226/634 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.