DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and Slc6a18

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001035782.1 Gene:Slc6a18 / 22598 MGIID:1336892 Length:615 Species:Mus musculus


Alignment Length:657 Identity:230/657 - (35%)
Similarity:321/657 - (48%) Gaps:134/657 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ISDERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELAL 87
            |.|||..|..|:.:|||.|||||.|.|:|||||||..:||||||:||.|.||..||||||:|||:
Mouse    13 IEDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAFLIPYFIALVFEGIPLFYIELAI 77

  Fly    88 GQHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTSCNNIW 152
            ||..|:|:|..|..:.|...|:|.....::|.|..|||.::.|.|.||..||.:.|||::|    
Mouse    78 GQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLNSFQHPLPWSTC---- 138

  Fly   153 NTPNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVGHVEGFQSAASEYFN 217
                                                       .||.:..|.|:..||:.:..:.
Mouse   139 -------------------------------------------PLDLNRTGFVQECQSSGTVSYF 160

  Fly   218 RYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAVLLILLIR 282
            .|...||.:..|.:.|.|:|.:.|||:..:...|..:.:||.::|||::|||||||.||.|.|||
Mouse   161 WYRQTLNITSDISNTGTIQWKLFLCLVACWSTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIR 225

  Fly   283 GLTLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVYKDALL 347
            ||||||:..|:.|..|||...:....||:|||||:||||...||..:|:||||...||..|||::
Mouse   226 GLTLPGATEGLIYLFTPNMKTLQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVI 290

  Fly   348 TSFINSATSFIAGFVIFSVLG---------------------------------------YMAHT 373
            .:.:||.||..|...||||:|                                       |:..|
Mouse   291 IALVNSMTSLYASIAIFSVMGFKASNDYGRCLDRNILSLINEFDLPELSISRDEYPSVLMYLNAT 355

  Fly   374 LGVRIE-------------DVATEGPGLVFVVYPAAIATMPASTFWALIFFMMLLTLGLDSSFGG 425
            ...|:.             |.:..||||.|:|:..|:..||.::.|:::||.||.||||.|.||.
Mouse   356 QTARVAQLPLKTCHLEDFLDKSASGPGLAFIVFTEAVLHMPGASVWSVLFFGMLFTLGLSSMFGN 420

  Fly   426 SEAIITALSD------EFPKIKRNRELFVAGLFSLYFVVGLASCTQGGFYFFHLLDRYAAGYSIL 484
            .|.:||.|.|      ..||     |:....:....|:..:....|.|.|:..:.|.:||..:::
Mouse   421 MEGVITPLLDMGILPKGIPK-----EVMTGVICFACFLSAICFTLQSGGYWLEIFDSFAASLNLI 480

  Fly   485 VAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVAPIFL--LFITVYGLIGYEPLTY 547
            :..|.|.:.|..|||..||.:||..|.|..||.||||.||.|:|:.|  :|::...|:...|.:|
Mouse   481 IFAFMEVVGVIHIYGMKRFCDDIEWMTGRRPGLYWQVTWRVVSPMLLFGIFLSYIVLLIQTPPSY 545

  Fly   548 -------------ADYVYPSWANALGWCIAGSSV--VMIPAVAIFKLLSTPGSLRQRF--TILTT 595
                         .:..||.|....  |:..|.:  :.:|.||:.:|||   ..:||:  |.|.:
Mouse   546 KAWNPQYEHFPSREEKFYPGWVQVT--CVLLSFLPSLWVPGVALAQLLS---QYKQRWKATHLES 605

  Fly   596 PWRDQQS 602
            ..:.|:|
Mouse   606 GLKLQES 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 225/646 (35%)
Slc6a18NP_001035782.1 SLC6sbd_B0AT3 16..591 CDD:212086 219/628 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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